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13_1_40cm_2_scaffold_964

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_964_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2..847
DNA (846bp) protein (282aa)
Putative hydrolases or acyltransferases(Alpha/beta hydrolase superfamily) protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2Y7_9PROT rbh
alpha/beta family hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
alpha/beta hydrolase fold family protein
13_1_40cm_2_scaffold_964_2
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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1204..1629
DNA (426bp) protein (142aa)
Transport protein n=2 Tax=Vibrio tubiashii RepID=I1DJ48_9VIBR
MFS transporter
MFS transporter {ECO:0000313|EMBL:AIW17263.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
13_1_40cm_2_scaffold_964_3
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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1629..2252
DNA (624bp) protein (208aa)
transport protein id=12554412 bin=CNBR_ACIDO species=Vibrio tubiashii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Transporter, major facilitator family {ECO:0000313|EMBL:EEB78364.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
transport protein
13_1_40cm_2_scaffold_964_4
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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2252..2536
DNA (285bp) protein (95aa)
MFS transporter
transport protein id=12554412 bin=CNBR_ACIDO species=Vibrio tubiashii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Transporter, major facilitator family {ECO:0000313|EMBL:EEB78364.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
13_1_40cm_2_scaffold_964_5

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2664..3572
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 126 RepID=E3T716_9BACT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36110.1}; TaxID=698379 species="Bacteria; environmental samples.;" source="uncultured bacterium 126.;"
hypothetical protein
13_1_40cm_2_scaffold_964_6

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3569..5137
DNA (1569bp) protein (523aa)
Pyrrolo-quinoline quinone n=1 Tax=uncultured bacterium 126 RepID=E3T715_9BACT rbh
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ADC36109.1}; TaxID=698379 species="Bacteria; environmental samples.;" source="uncultured bacterium 126.;"
pyrrolo-quinoline quinone
13_1_40cm_2_scaffold_964_7
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5170..6024
DNA (855bp) protein (285aa)
xylose isomerase domain-containing protein id=12557035 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
xylose isomerase domain-containing protein TIM barrel Tax=GWF2_Verrucomicrobia_62_7_curated
xylose isomerase domain-containing protein
13_1_40cm_2_scaffold_964_8
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

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6037..6447
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI000365CCD5
3-ketoacyl-ACP reductase Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
3-ketoacyl-ACP reductase
13_1_40cm_2_scaffold_964_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6475..6828
DNA (354bp) protein (118aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZV7_SOLUE
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABJ84808.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_2_scaffold_964_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6825..9461
DNA (2637bp) protein (879aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZV8_SOLUE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84807.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_964_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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9721..10188
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037021F0
transposase Tax=RBG_16_Nitrospirae_64_22_curated
transposase
13_1_40cm_2_scaffold_964_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(10256..10684)
DNA (429bp) protein (143aa)
metal-sulfur cluster biosynthetic enzyme Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Uncharacterized protein id=2101219 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PaaD-like protein
13_1_40cm_2_scaffold_964_13
CSP1_5_NC10, NC10, Bacteria

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comp(10699..11157)
DNA (459bp) protein (153aa)
hypothetical protein id=14431319 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
NifU family SUF system FeS assembly protein
13_1_40cm_2_scaffold_964_14
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11250..12506)
DNA (1257bp) protein (419aa)
sufS; cysteine desulfurase (EC:2.8.1.7) Tax=RBG_13_Deltaproteobacteria_65_10_curated
sufS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIS1_9BACT
13_1_40cm_2_scaffold_964_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12503..13921)
DNA (1419bp) protein (473aa)
sufD; sufD, needed for fhuF Fe-S center production/stability Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SufD, needed for fhuF Fe-S center production/stability id=2101211 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron ABC transporter permease
13_1_40cm_2_scaffold_964_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13932..14711)
DNA (780bp) protein (260aa)
sufC; Fe-S cluster assembly ATP-binding protein SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein id=12557412 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Iron-sulfur cluster assembly ATPase protein SufC
13_1_40cm_2_scaffold_964_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14718..16163)
DNA (1446bp) protein (482aa)
ycf24; cysteine desulfurase; K09014 Fe-S cluster assembly protein SufB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
sufB; Fe-S cluster assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=12557411 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Iron-regulated ABC transporter membrane component SufB
13_1_40cm_2_scaffold_964_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16160..16537)
DNA (378bp) protein (126aa)
iscA; hypothetical protein; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein id=12557410 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iron-sulfur cluster assembly accessory protein
13_1_40cm_2_scaffold_964_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16534..17025)
DNA (492bp) protein (164aa)
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Rrf2 family protein id=12557409 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
BadM/Rrf2 family transcriptional regulator
13_1_40cm_2_scaffold_964_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17410..17880)
DNA (471bp) protein (157aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022M7_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ84073.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_2_scaffold_964_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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18046..18495
DNA (450bp) protein (150aa)
Putative signal transduction protein with CBS domains n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMQ1_9BACT
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EEF58826.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision
histidine kinase
13_1_40cm_2_scaffold_964_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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18599..19117
DNA (519bp) protein (173aa)
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 id=1968672 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_40cm_2_scaffold_964_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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19117..19254
DNA (138bp) protein (46aa)
nuoK; NADH-quinone oxidoreductase membrane subunit K (EC:1.6.99.5); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 23 items

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