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13_1_40cm_2_scaffold_1173_18

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 20528..21031

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 180.0
  • Bit_score: 137
  • Evalue 1.10e-29
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 158.0
  • Bit_score: 176
  • Evalue 4.00e-41
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 180.0
  • Bit_score: 137
  • Evalue 3.10e-30

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 504
GTGCCCCAGGATCTCGCGGAGGTCTACCGCACCACCTACCGCGCGCTCGTGCGGTTCCTGTACCGCAAGGTGTGGGACGCCGAGCGGGCGGAGGACTTGGCCCAGGAGGCCTTTGCCCGGGCGGTGGTCCACAAACCCGACAACGCGAGGGGGTGGCTGTTCATCGTGGCGGCGAACATGGCGCGGGACGAGGCGCGGCGCGCGGCTCGGGAGCGGCGGCACCTCACGCTGCTCACGGCCGAGCCGCAGGAGAGCACGTCGGGTACCGATGAGGCGTTGGAGGTCGAGAGCGACCGGGCGCGGGTCCGGGCTGCGCTCGACGAGCTCTCGCCGCGCGACCACGAGGTACTGGTGCTATGGGATTCGGGACTATCATACGAAGAGATCGCCGCGCAGACCGGCCTGGCGCGCGGCGCGATCGGCACGACGCTGTCACGGGCGCGCCGGCGGTTGGTGCAGGCTTACGAAGCCGGAAAGCCAGGTGAGCATGTTGCACGTGGATGA
PROTEIN sequence
Length: 168
VPQDLAEVYRTTYRALVRFLYRKVWDAERAEDLAQEAFARAVVHKPDNARGWLFIVAANMARDEARRAARERRHLTLLTAEPQESTSGTDEALEVESDRARVRAALDELSPRDHEVLVLWDSGLSYEEIAAQTGLARGAIGTTLSRARRRLVQAYEAGKPGEHVARG*