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13_1_40cm_2_scaffold_5223_9

Organism: 13_1_40cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(5592..6104)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 167.0
  • Bit_score: 313
  • Evalue 2.10e-82
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 168.0
  • Bit_score: 255
  • Evalue 3.70e-65
ECF subfamily RNA polymerase sigma-24 similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 176.0
  • Bit_score: 151
  • Evalue 2.80e-34

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGGCCTCCGACGATTTCCACCGGGCCGCGCTCGAGCATCTGGACGCGCTCTACAACTTCGCCATGTACCTGACCCGGAATCCGCCCGAGGCCGACGACCTCGTCCAGGAAACCTACCTCCGCGCTTTCCGGTTTTCCCACCGGTTCCAGCCGGGAACCCATCTCCGCGCCTGGCTGTTTCAAATCTTGAGGAACACGTTTTTGACGTTCTATCGCCTTCGCGAGCGGGAATCCGCGCTCGCCGAAGACGGTGTTCCAACCTGGGACGTTCCGATGTTTCACGACGCGCCCGAAGAGTCGAGTGGCGCCGTCGAGGCGCACACGGATCTCGAGCGCGCTCTGCGGCGCCTGCCCGAGGAATTCCGCACGGTGCTCCTGCTCGCGGAAGTCGAAGGCATGGCCCTCGAGGACGTGGCTCGGGTGCTGGCCTGTCCGGTCGGCACCGTCAAGTCGCGGATCTTCAGGGCGAAGGAGCGGTTGCGCGGGCTCTTGCGGGACTACACAAAAGAATGA
PROTEIN sequence
Length: 171
VASDDFHRAALEHLDALYNFAMYLTRNPPEADDLVQETYLRAFRFSHRFQPGTHLRAWLFQILRNTFLTFYRLRERESALAEDGVPTWDVPMFHDAPEESSGAVEAHTDLERALRRLPEEFRTVLLLAEVEGMALEDVARVLACPVGTVKSRIFRAKERLRGLLRDYTKE*