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13_1_40cm_scaffold_19995

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_19995_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1208)
DNA (1206bp) protein (402aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Replication restart DNA helicase PriA id=1832186 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
primosomal protein N'
13_1_40cm_scaffold_19995_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1515..1712
DNA (198bp) protein (66aa)
helix-turn-helix domain-containing protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Helix-turn-helix transcriptional regulator, XRE family id=1832184 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
XRE family transcriptional regulator
13_1_40cm_scaffold_19995_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1716..2801
DNA (1086bp) protein (362aa)
Type IV pilus biogenesis ATPase PilM id=1832182 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWD2_Deltaproteobacteria_55_8_curated
pilus assembly protein PilM
13_1_40cm_scaffold_19995_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2798..3397
DNA (600bp) protein (200aa)
fimbrial assembly; K02663 type IV pilus assembly protein PilN Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Fimbrial assembly family protein id=1832180 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilN; type IV pilus biogenesis protein PilN
13_1_40cm_scaffold_19995_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3400..3603
DNA (204bp) protein (68aa)
Type IV pilus biogenesis protein PilO id=1832178 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilO; type IV pilus biogenesis protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
13_1_40cm_scaffold_19995_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3813..3968
DNA (156bp) protein (52aa)
pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=GWD2_Deltaproteobacteria_55_8_curated
Type IV pilus biogenesis protein PilO id=1832178 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_19995_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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3980..4609
DNA (630bp) protein (210aa)
pilP; fimbrial assembly protein (EC:3.4.24.-)
hypothetical protein; K02665 type IV pilus assembly protein PilP Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Putative uncharacterized protein id=1832175 bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_19995_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4641..5441
DNA (801bp) protein (267aa)
Type IV pilus secretin PilQ id=1832173 bin=GWD2_Deltaproteobacteria_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilQ; type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
type IV pilus secretin PilQ
Displaying 8 items

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