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13_1_40cm_scaffold_24676

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_24676_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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1..102
DNA (102bp) protein (34aa)
acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
13_1_40cm_scaffold_24676_2
unknown

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comp(150..263)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_24676_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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303..1574
DNA (1272bp) protein (424aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Serine hydroxymethyltransferase id=4605933 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
glyA; serine hydroxymethyltransferase
13_1_40cm_scaffold_24676_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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1645..2169
DNA (525bp) protein (175aa)
Transcriptional repressor NrdR n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FST4_STIAD
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RBG_16_Acidobacteria_68_9_curated
nrdR; transcriptional repressor
13_1_40cm_scaffold_24676_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2201..3799
DNA (1599bp) protein (533aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RK07_MOOTA
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosph
13_1_40cm_scaffold_24676_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3792..4322
DNA (531bp) protein (177aa)
GTP cyclohydrolase II (EC:3.5.4.25 4.1.2.-); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase id=4677528 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_40cm_scaffold_24676_7
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4333..4800
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
ribH; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase id=4605939 bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_scaffold_24676_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4888..5322
DNA (435bp) protein (145aa)
N utilization substance protein B homolog id=1746588 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NusB antitermination factor; K03625 N utilization substance protein B Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
NusB antitermination factor
13_1_40cm_scaffold_24676_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5306..5512
DNA (207bp) protein (69aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1547597 species="Bacteria; Bacter
leucyl-tRNA synthetase n=1 Tax=Cohnella laeviribosi RepID=UPI00037F7145
leucyl-tRNA synthetase
Displaying 9 items

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