ggKbase home page

13_1_40cm_scaffold_61365

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_61365_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..857)
DNA (855bp) protein (285aa)
Transcription termination factor Rho id=1960445 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
transcription termination factor Rho
13_1_40cm_scaffold_61365_2
unknown

Not on your lists

987..1340
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_scaffold_61365_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1166..2047)
DNA (882bp) protein (294aa)
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Ca
Pseudouridine synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN69_9BACT
13_1_40cm_scaffold_61365_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2071..3003)
DNA (933bp) protein (311aa)
riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWD2_Deltaproteobacteria_55_8_curated
Riboflavin biosynthesis protein RibF id=1960454 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
riboflavin biosynthesis protein RibF
13_1_40cm_scaffold_61365_5
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3043..3900)
DNA (858bp) protein (286aa)
Tol-pal system protein YbgF n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9K8_9DELT
tol-pal system protein YbgF Tax=CG_Delta_01
TPR repeat-containing protein
13_1_40cm_scaffold_61365_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..4352)
DNA (426bp) protein (142aa)
OmpA/MotB domain protein id=1960462 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
OmpA/MotB domain-containing protein; K03640 peptidoglycan-associated lipoprotein Tax=GWD2_Deltaproteobacteria_55_8_curated
peptidoglycan-associated lipoprotein
Displaying 6 items

View Taxonomy