ggKbase home page

13_1_40cm_scaffold_117188

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_117188_1
bacterium UASB270, Bacteria

Not on your lists

comp(2..361)
DNA (360bp) protein (120aa)
Diguanylate cyclase with PAS/PAC and GAF sensors {ECO:0000313|EMBL:GAK56252.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
putative PAS/PAC sensor protein id=1868327 bin=GWB2_Deltaproteobacteria_65_81 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
PAS/PAC sensor hybrid histidine kinase
13_1_40cm_scaffold_117188_2
unknown

Not on your lists

457..630
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_117188_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..909)
DNA (354bp) protein (118aa)
regulatory protein MerR Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
MerR family transcriptional regulator id=14623168 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
MerR family transcriptional regulator
13_1_40cm_scaffold_117188_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(924..1217)
DNA (294bp) protein (98aa)
Integration host factor subunit alpha n=1 Tax=uncultured bacterium RepID=K1Z7D0_9BACT
ihfA-1; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
histone family protein DNA-binding protein
13_1_40cm_scaffold_117188_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1252..3228)
DNA (1977bp) protein (659aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Phenylalanine--tRNA ligase beta subunit id=2049422 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phenylalanyl-tRNA synthetase subunit beta
13_1_40cm_scaffold_117188_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3241..3540)
DNA (300bp) protein (100aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Phenylalanine--tRNA ligase alpha subunit id=2049417 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phenylalanyl-tRNA synthetase subunit alpha
Displaying 6 items

View Taxonomy