name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_3_scaffold_13_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(1..792)
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proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=14626923 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit M
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13_1_40cm_3_scaffold_13_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(741..2645)
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proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14626924 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L
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13_1_40cm_3_scaffold_13_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(2650..2952)
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NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14626925 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
nuoK; NADH-quinone oxidoreductase chain K
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13_1_40cm_3_scaffold_13_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(2949..3443)
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proton-translocating NADH-quinone oxidoreductase subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) id=3051773 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proton-translocating NADH-quinone oxidoreductase subunit J
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13_1_40cm_3_scaffold_13_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(3440..4015)
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NADH-quinone oxidoreductase subunit i (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14626927 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH-quinone oxidoreductase subunit i (EC:1.6.99.5)
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13_1_40cm_3_scaffold_13_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(4005..4988)
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respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] id=14626928 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH dehydrogenase subunit H (EC:1.6.5.3)
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13_1_40cm_3_scaffold_13_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(4985..6148)
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NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.5.3 1.6.99.5) id=14626929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5)
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13_1_40cm_3_scaffold_13_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(6247..6882)
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hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14626930 bin=bin7_NC10_sister species=Bradyrhizobium elkanii genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative nipsnap superfamily
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13_1_40cm_3_scaffold_13_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6908..7357)
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NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=14626931 bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C
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13_1_40cm_3_scaffold_13_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria
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Not on your lists |
comp(7354..7995)
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nuoB; NADH dehydrogenase I subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
NAD; NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) (EC:1.6.5.3) id=14626932 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
nuoB; NADH dehydrogenase I subunit B
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13_1_40cm_3_scaffold_13_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria
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Not on your lists |
comp(7986..8339)
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NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
nuoA; NADH-quinone oxidoreductase, subunit A id=14626933 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
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13_1_40cm_3_scaffold_13_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
8451..9164
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rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
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13_1_40cm_3_scaffold_13_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(9161..10732)
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ifoB_iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-oxoacid:ferredoxin oxidoreductase, gamma subunit id=1906446 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
ifoB_iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit
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13_1_40cm_3_scaffold_13_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(10729..12873)
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ifoA_iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit Tax=GWA2_Rokubacteria_73_35_curated
Indolepyruvate ferredoxin oxidoreductase, alpha subunit id=1906308 bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein
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13_1_40cm_3_scaffold_13_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12897..13232)
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Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XJK5_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76752.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
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13_1_40cm_3_scaffold_13_16
unknown
|
Not on your lists |
13335..13712
|
This feature has no annotations |
|
13_1_40cm_3_scaffold_13_trna_1
unknown
|
Not on your lists |
13953..14025
|
transferRNA
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13_1_40cm_3_scaffold_13_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
14415..15446
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tapB; type IV pilus assembly protein tapB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=14625671 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
tapB; type IV pilus assembly protein tapB
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13_1_40cm_3_scaffold_13_18
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15524..16600)
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Micrococcal nuclease-like protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LW6_SYMTH
micrococcal nuclease-like protein
Micrococcal nuclease-like protein {ECO:0000313|EMBL:BAD41330.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium t
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13_1_40cm_3_scaffold_13_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(16674..17645)
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OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidoglycan-associated lipoprotein id=2546000 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidoglycan-associated lipoprotein
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13_1_40cm_3_scaffold_13_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17840..18487)
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hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=1906305 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_13_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(18484..19128)
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type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 12 id=1906302 bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 12 methyltransferase
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13_1_40cm_3_scaffold_13_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(19118..20587)
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Putative uncharacterized protein id=1906301 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
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13_1_40cm_3_scaffold_13_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(20587..21084)
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id=3674960 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
|
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13_1_40cm_3_scaffold_13_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(21485..22327)
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hypothetical protein id=3850604 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
|
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13_1_40cm_3_scaffold_13_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
22558..22701
|
NAD-dependent DNA ligase LigA Tax=GWC2_Rokubacteria_70_16_curated
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13_1_40cm_3_scaffold_13_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
22747..23916
|
diguanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
Diguanylate cyclase id=3850608 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
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13_1_40cm_3_scaffold_13_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(23925..24341)
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Putative F420-dependent enzyme id=4327982 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein Tax=GWA2_Rokubacteria_73_35_curated
PPOX class F420-dependent protein
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13_1_40cm_3_scaffold_13_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24347..25213)
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alpha/beta hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alpha/beta hydrolase family protein id=14627252 bin=bin7_NC10_sister species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
rbh
alpha/beta hydrolase family protein
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13_1_40cm_3_scaffold_13_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(25210..25968)
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NAD-dependent epimerase/dehydratase id=4911885 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia graminis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase Tax=GWA2_Rokubacteria_73_35_curated
NAD-dependent epimerase/dehydratase
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