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13_1_40cm_3_scaffold_119

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_119_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195..1352
DNA (1158bp) protein (386aa)
bchP-like; geranylgeranyl hydrogenase related Tax=RBG_16_Deltaproteobacteria_48_10_curated
Geranylgeranyl reductase id=5800202 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
geranylgeranyl reductase family
13_1_40cm_3_scaffold_119_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

1524..2873
DNA (1350bp) protein (450aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
nsd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=14428695 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
13_1_40cm_3_scaffold_119_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(2898..3869)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL99588.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldili
13_1_40cm_3_scaffold_119_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3962..4627
DNA (666bp) protein (222aa)
conserved exported protein of unknown function Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Uncharacterized protein id=3089745 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_119_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4663..5433)
DNA (771bp) protein (257aa)
exopolysaccharide biosynthesis protein (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
exopolysaccharide biosynthesis protein (EC:3.1.3.48)
Exopolysaccharide biosynthesis protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F266_ACIC5
13_1_40cm_3_scaffold_119_6
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5449..5784)
DNA (336bp) protein (112aa)
Predicted permease n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB3_9EURY
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
hypothetical protein
13_1_40cm_3_scaffold_119_7
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5825..6229)
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=2080367 bin=GWE2_Bacteroidetes_41_25 species=unknown genus=Krokinobacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
protein of unknown function DUF81 Tax=GWA2_Bacteroidetes_40_15_curated
protein of unknown function DUF81
13_1_40cm_3_scaffold_119_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6524..7879
DNA (1356bp) protein (452aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEQ7_MYXFH
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEI66128.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
13_1_40cm_3_scaffold_119_9
unknown

Not on your lists

comp(7928..8803)
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_10
unknown

Not on your lists

comp(8898..9071)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

9366..10358
DNA (993bp) protein (331aa)
WcaG; nucleoside-diphosphate-sugar epimerases; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IU51_THEET
hypothetical protein
13_1_40cm_3_scaffold_119_12
unknown

Not on your lists

10439..10678
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10768..14247)
DNA (3480bp) protein (1160aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000369D84C
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG93481.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_119_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14449..17769)
DNA (3321bp) protein (1107aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL58129.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
BNR repeat-containing glycosyl hydrolase
13_1_40cm_3_scaffold_119_15
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

17972..20395
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB28A
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
organic solvent tolerance protein
13_1_40cm_3_scaffold_119_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

20513..21961
DNA (1449bp) protein (483aa)
Amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=14431072 bin=bin3_NC10 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CSP1_5_NC10
glutamyl-tRNA(gln) amidotransferase subunit a
13_1_40cm_3_scaffold_119_17
unknown

Not on your lists

22045..22395
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_18
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

22535..23008
DNA (474bp) protein (158aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E80280
3-demethylubiquinone-9 3-methyltransferase Tax=RBG_16_Chloroflexi_52_11_curated
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_3_scaffold_119_19
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(23072..23716)
DNA (645bp) protein (215aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHH3_9BACT
PAP2 superfamily protein Tax=RBG_13_RIF03_48_7_curated
phosphoesterase PA-phosphatase-like protein
13_1_40cm_3_scaffold_119_20
unknown

Not on your lists

23768..24940
DNA (1173bp) protein (391aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_21
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(25098..25595)
DNA (498bp) protein (166aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5E9B0
CDP-alcohol phosphatidyltransferase
13_1_40cm_3_scaffold_119_22
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

26178..27044
DNA (867bp) protein (289aa)
Cytochrome c-type biogenesis protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UT81_9AQUI
cytochrome C biogenesis protein transmembrane region; K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ccdA; cytochrome c biogenesis protein
13_1_40cm_3_scaffold_119_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27078..27647
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D4353
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ABF39186.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_3_scaffold_119_24
unknown

Not on your lists

27975..28331
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_3_scaffold_119_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(28465..29250)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3H2_TERSS
Putative MetA-pathway of phenol degradation {ECO:0000313|EMBL:CDM64847.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
hypothetical protein
13_1_40cm_3_scaffold_119_26
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(29317..30345)
DNA (1029bp) protein (343aa)
Tyrosine recombinase XerC n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEF5_TERRK
xerC; tyrosine recombinase XerC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
site-specific recombinase XerD
13_1_40cm_3_scaffold_119_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(30446..33166)
DNA (2721bp) protein (907aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=204669 species="Bacteria; Acidobacte
DNA topoisomerase 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA9_KORVE
DNA topoisomerase
13_1_40cm_3_scaffold_119_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(33354..34481)
DNA (1128bp) protein (376aa)
DNA protecting protein DprA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA8_KORVE
DNA processing protein DprA; K04096 DNA processing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA processing protein DprA
13_1_40cm_3_scaffold_119_29
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34591..36963)
DNA (2373bp) protein (791aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QY1_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_40cm_3_scaffold_119_30
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(37167..38420)
DNA (1254bp) protein (418aa)
putative class-III aminotransferase Tax=RBG_16_Aminicenantes_63_16_curated
putative class-III aminotransferase id=24392623 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
aminotransferase class-III
Displaying 30 items

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