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13_1_40cm_3_scaffold_1617

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1617_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3..1055)
DNA (1053bp) protein (351aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-) Tax=RBG_16_Archaea_50_20_curated
copA; copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting P-type ATPase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG
13_1_40cm_3_scaffold_1617_2
unknown

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comp(1058..2026)
DNA (969bp) protein (323aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(2106..2744)
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N470_9ARCH
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_16_Thaumarchaeota_49_8_curated
transcriptional regulator
13_1_40cm_3_scaffold_1617_4
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2915..4456)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI000372E770
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
13_1_40cm_3_scaffold_1617_5
unknown

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comp(4864..6018)
DNA (1155bp) protein (385aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_6
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(6110..7534)
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Volvox carteri RepID=D8U4N9_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ45309.1}; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carte
hypothetical protein
13_1_40cm_3_scaffold_1617_7
unknown

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comp(7534..7881)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8083..9072
DNA (990bp) protein (330aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_40cm_3_scaffold_1617_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9035..9508
DNA (474bp) protein (158aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1617_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(9486..9725)
DNA (240bp) protein (80aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1617_11
RBG_16_Archaea_50_20_curated, Archaea

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9946..10521
DNA (576bp) protein (192aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_40cm_3_scaffold_1617_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10624..11793
DNA (1170bp) protein (390aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTM2_9EURY
13_1_40cm_3_scaffold_1617_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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11790..12275
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
hypothetical protein; K09122 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_1617_14
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

12272..12907
DNA (636bp) protein (212aa)
Protein Tpen_0748 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=Y748_THEPD
AMMECR1 domain-containing protein
Protein Tpen_0748 {ECO:0000255|HAMAP-Rule:MF_00645}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk
13_1_40cm_3_scaffold_1617_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12904..14091
DNA (1188bp) protein (396aa)
Glycosyltransferase 28 domain protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6Y7_KORCO
glycosyltransferase Tax=RBG_16_Archaea_50_20_curated
glycosyltransferase family 28 protein
13_1_40cm_3_scaffold_1617_16
unknown

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14169..14624
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_17
unknown

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14738..14932
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14981..15763
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036D57CD
tRNA methyltransferase complex GCD14 subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
type 11 methyltransferase
13_1_40cm_3_scaffold_1617_19
unknown

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15875..16057
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_1617_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16132..17565
DNA (1434bp) protein (478aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Bathyarchaeota_48_13_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E642_METEZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_3_scaffold_1617_21
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

17687..18385
DNA (699bp) protein (233aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Salinispora arenicola RepID=UPI0000EB8EF7
glycosyltransferase group 2 Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
glycosyl transferase family protein
13_1_40cm_3_scaffold_1617_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18382..19068)
DNA (687bp) protein (229aa)
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein; K07503 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative nuclease of the RecB family
13_1_40cm_3_scaffold_1617_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

19128..19781
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DIJ1_9PROT
UbiE/COQ5 methyltransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
biotin biosynthesis protein BioC
13_1_40cm_3_scaffold_1617_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

20064..20303
DNA (240bp) protein (80aa)
Putative snRNP Sm-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID4_NITGG
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative snRNP Sm-like protein
13_1_40cm_3_scaffold_1617_25
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20372..20959)
DNA (588bp) protein (196aa)
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein id=24429345 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_1617_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20963..22516)
DNA (1554bp) protein (518aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=RBG_13_Bathyarchaeota_38_9_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICB7_ACIB4
13_1_40cm_3_scaffold_1617_27
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(22649..23296)
DNA (648bp) protein (216aa)
transaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcac
Probable transaldolase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTU6_METIM
13_1_40cm_3_scaffold_1617_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23357..24250)
DNA (894bp) protein (298aa)
tktB; transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AFU60392.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFU60392.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
Transketolase, C-terminal subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
13_1_40cm_3_scaffold_1617_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24250..24936)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium ultunense Esp RepID=M1ZEX2_9CLOT
rpe; ribulose-phosphate 3-epimerase
13_1_40cm_3_scaffold_1617_30
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24933..25766)
DNA (834bp) protein (278aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
transketolase
Transketolase domain protein {ECO:0000313|EMBL:ADG83597.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR)
Displaying items 1-30 of 39 in total

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