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13_1_40cm_3_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_16_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

82..1950
DNA (1869bp) protein (623aa)
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_16_2
unknown

Not on your lists

comp(1958..2560)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_40cm_3_scaffold_16_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2571..3581)
DNA (1011bp) protein (337aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyphosphate kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3A3_9CYAN
polyphosphate kinase 1
13_1_40cm_3_scaffold_16_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3524..5758)
DNA (2235bp) protein (745aa)
ppk; polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H4E9_9ACTO
13_1_40cm_3_scaffold_16_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5770..8328)
DNA (2559bp) protein (853aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_16_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8331..10889)
DNA (2559bp) protein (853aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27910.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_16_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10902..11957)
DNA (1056bp) protein (352aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA99_9SPHN
hypothetical protein
13_1_40cm_3_scaffold_16_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12070..13944)
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036361C6
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_1_40cm_3_scaffold_16_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13941..16778)
DNA (2838bp) protein (946aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ32_KORVE
protein kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_16_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16884..17366)
DNA (483bp) protein (161aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG88813.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_16_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17503..18654
DNA (1152bp) protein (384aa)
Rhodanese domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM47_THEM7
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ADU50377.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="The
13_1_40cm_3_scaffold_16_12
unknown

Not on your lists

comp(18691..19026)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_16_13
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

19228..21399
DNA (2172bp) protein (724aa)
vault protein, inter-alpha-trypsin domain-containing protein; K07114 uncharacterized protein Tax=CG_Arma_01
atm:ANT_10740 hypothetical protein; K07114 uncharacterized protein id=1246009 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
hypothetical protein
13_1_40cm_3_scaffold_16_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21508..22011
DNA (504bp) protein (168aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_16_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21995..23146
DNA (1152bp) protein (384aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87978.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_16_16
unknown

Not on your lists

comp(23154..23489)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_16_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23668..24879)
DNA (1212bp) protein (404aa)
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein id=24582159 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_3_scaffold_16_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24876..25430)
DNA (555bp) protein (185aa)
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type Fe3+ transport system protein id=3999886 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative cytochrome c subfamily
13_1_40cm_3_scaffold_16_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25423..25968)
DNA (546bp) protein (182aa)
Hypothetical membrane protein id=3806666 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical membrane protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_16_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25965..27323)
DNA (1359bp) protein (453aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP rbh
Polysulfide reductase NrfD
13_1_40cm_3_scaffold_16_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(27316..30309)
DNA (2994bp) protein (998aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_5_NC10
putative oxidoreductase
13_1_40cm_3_scaffold_16_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30321..30887)
DNA (567bp) protein (189aa)
cytochrome c3 Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
13_1_40cm_3_scaffold_16_23
unknown

Not on your lists

comp(31008..31478)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_3_scaffold_16_24
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31475..34606)
DNA (3132bp) protein (1044aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQ23_HALH1
glycosyl hydrolase
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEE53227.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;
13_1_40cm_3_scaffold_16_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(34714..35847)
DNA (1134bp) protein (378aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_1_40cm_3_scaffold_16_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(35828..37006)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_16_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(37039..38160)
DNA (1122bp) protein (374aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
13_1_40cm_3_scaffold_16_28
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38238..39020)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000380DAFC
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KFM95769.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus ma
dihydrodipicolinate synthetase
13_1_40cm_3_scaffold_16_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(39140..39913)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_16_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(39913..40713)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 41 in total

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