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13_1_40cm_3_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_163_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3..593
DNA (591bp) protein (197aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDH5_PYRF1
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
fibrillarin
13_1_40cm_3_scaffold_163_2

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607..1050
DNA (444bp) protein (148aa)
Protein containing DUF61 n=1 Tax=uncultured organism RepID=M1P2D2_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_3_scaffold_163_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1231..2259
DNA (1029bp) protein (343aa)
Transcriptional regulator, ArsR family n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GEV2_9FIRM
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_163_4
RBG_16_Archaea_50_20_curated, Archaea

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2315..3562
DNA (1248bp) protein (416aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
imidazolonepropionase n=1 Tax=Brevibacillus sp. phR RepID=UPI00030B107E
imidazolonepropionase
13_1_40cm_3_scaffold_163_5
RBG_16_Archaea_50_20_curated, Archaea

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3676..5250
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
Urocanate hydratase n=5 Tax=Geobacillus RepID=G8N2P4_GEOTH
Urocanate hydratase
13_1_40cm_3_scaffold_163_6
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5534..6328)
DNA (795bp) protein (265aa)
F420-dependent oxidoreductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDG8_9EURY
F420-dependent oxidoreductase
F420-dependent oxidoreductase {ECO:0000313|EMBL:AFV24020.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus
13_1_40cm_3_scaffold_163_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(6330..7583)
DNA (1254bp) protein (418aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CSN7_THEYO
13_1_40cm_3_scaffold_163_8
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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8023..9267
DNA (1245bp) protein (415aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VSG0_9EURY rbh
13_1_40cm_3_scaffold_163_9
RBG_16_Archaea_50_20_curated, Archaea

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9721..10317
DNA (597bp) protein (199aa)
Nitrate transport permease n=1 Tax=Raphidiopsis brookii D9 RepID=D4TNM4_9NOST
ssuC1; aliphatic sulfonates ABC transporter permease SsuC Tax=RBG_16_Archaea_50_20_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
13_1_40cm_3_scaffold_163_10
RBG_16_Archaea_50_20_curated, Archaea

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10308..11144
DNA (837bp) protein (279aa)
Putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8T7_METCZ
taurine-transporting AtPase; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
ssuB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
13_1_40cm_3_scaffold_163_11
unknown

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11174..11719
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_3_scaffold_163_12

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comp(12309..13259)
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM74115.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
secreted metalloprotease id=7201139 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
peptidase M6 immune inhibitor A
13_1_40cm_3_scaffold_163_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13540..15123
DNA (1584bp) protein (528aa)
UPF0219 protein Mfer_0083 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWZ8_METFV
hydroxymethylglutaryl-CoA synthase Tax=RBG_13_Bathyarchaeota_38_9_curated
hydroxymethylglutaryl-CoA synthase
13_1_40cm_3_scaffold_163_14
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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15181..16341
DNA (1161bp) protein (387aa)
butyryl-CoA dehydrogenase (EC:1.3.99.3)
acyl-CoA dehydrogenase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI000288716E
Uncharacterized protein {ECO:0000313|EMBL:EJZ70800.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OB
13_1_40cm_3_scaffold_163_15
unknown

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16425..16610
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_163_16
unknown

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comp(16641..16922)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_3_scaffold_163_17
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(16996..18198)
DNA (1203bp) protein (401aa)
Peptidase M24 n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QPW0_VULDI
peptidase M24 Tax=RBG_13_Bathyarchaeota_52_12_curated
peptidase M24
13_1_40cm_3_scaffold_163_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(18342..18929)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037F1D50
hsp20; heat shock protein Hsp20 Tax=RBG_13_Bathyarchaeota_38_9_curated
hsp20-4; heat shock protein Hsp20
13_1_40cm_3_scaffold_163_19
RBG_16_Archaea_50_20_curated, Archaea

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comp(18937..19683)
DNA (747bp) protein (249aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_163_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19765..20268)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GJY7_METTF
amino acid-binding ACT domain-containing protein; K07103 Tax=RBG_13_Bathyarchaeota_38_9_curated
regulatory protein
13_1_40cm_3_scaffold_163_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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20432..20767
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000380515C
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_163_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(20777..21346)
DNA (570bp) protein (190aa)
endA1; tRNA-splicing endonuclease (EC:3.1.27.9) Tax=RBG_16_Archaea_50_20_curated
endA2; tRNA-splicing endonuclease (EC:4.6.1.16)
tRNA intron endonuclease n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJR1_9ARCH
13_1_40cm_3_scaffold_163_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(21354..22013)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8B5_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_163_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(22081..23955)
DNA (1875bp) protein (625aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RBG_16_Archaea_50_20_curated
Glycine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECJ1_PYRF1 rbh
glycyl-tRNA synthetase
13_1_40cm_3_scaffold_163_25
unknown

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comp(24142..26760)
DNA (2619bp) protein (873aa)

This feature has no annotations

13_1_40cm_3_scaffold_163_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(27083..27313)
DNA (231bp) protein (77aa)
Small nuclear ribonucleoprotein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RZA4_CENSY
small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
small nuclear ribonucleoprotein
13_1_40cm_3_scaffold_163_27
RBG_16_Archaea_50_20_curated, Archaea

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27395..27898
DNA (504bp) protein (168aa)
PUA domain containing protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DV72_METV3
putative RNA-binding protein; K07575 PUA domain protein Tax=RBG_16_Archaea_50_20_curated
PUA domain-containing protein
13_1_40cm_3_scaffold_163_28
RBG_16_Archaea_50_20_curated, Archaea

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27926..28318
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=G3C9I1_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Protein of unknown function (DUF552)
13_1_40cm_3_scaffold_163_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(28331..30229)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein PH1404 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O50112_PYRHO
kh-domain/beta-lactamase-domain protein; K07041 Tax=RBG_13_Bathyarchaeota_38_9_curated
mRNA 3'-end processing factor
13_1_40cm_3_scaffold_163_30
RBG_16_Archaea_50_20_curated, Archaea

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comp(30296..30895)
DNA (600bp) protein (200aa)
proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
psmB2; proteasome, subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY12_METFV
Displaying items 1-30 of 49 in total

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