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13_1_40cm_3_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_157_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

138..2294
DNA (2157bp) protein (719aa)
phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A848_GEMAT rbh
13_1_40cm_3_scaffold_157_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2625..3863
DNA (1239bp) protein (413aa)
glgA; glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A847_GEMAT
13_1_40cm_3_scaffold_157_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3875..5533
DNA (1659bp) protein (553aa)
putative alpha-amylase (EC:3.2.1.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative alpha-amylase (EC:3.2.1.1) id=24483490 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative alpha-amylase (EC:3.2.1.1)
13_1_40cm_3_scaffold_157_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5530..7275
DNA (1746bp) protein (582aa)
Protein of unknown function DUF3536
Uncharacterized protein {ECO:0000313|EMBL:AHG87964.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glycoside hydrolase family 57 id=3927642 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_157_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7321..9198
DNA (1878bp) protein (626aa)
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (EC:2.4.1.25) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (EC:2.4.1.25)
Putative 4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLP9_9BACT
13_1_40cm_3_scaffold_157_6
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

9186..10289
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ54_9BACT
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
hypothetical protein
13_1_40cm_3_scaffold_157_7
unknown

Not on your lists

comp(10320..10835)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_3_scaffold_157_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11122..11646)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFX4_SINAD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative restriction endonuclease
13_1_40cm_3_scaffold_157_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11936..12358)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38009.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_157_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12609..13151
DNA (543bp) protein (181aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_157_11
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13290..14279
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1L4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EAU55177.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus fer
HI0933 family protein
13_1_40cm_3_scaffold_157_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14288..14959)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D834_9BURK
transposase for insertion sequence Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_157_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15027..15608
DNA (582bp) protein (194aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_157_14
unknown

Not on your lists

15605..15970
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_3_scaffold_157_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

15981..16406
DNA (426bp) protein (142aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
13_1_40cm_3_scaffold_157_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16523..17590)
DNA (1068bp) protein (356aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=GWA2_Rokubacteria_73_35_curated
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4793438 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_157_17
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17680..19530)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T2B2_9BRAD id=5224822 bin=16ft_combo_ws3_JS1 species=Bradyrhizobium sp. STM 3809 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
TPR domain protein
13_1_40cm_3_scaffold_157_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19533..20657)
DNA (1125bp) protein (375aa)
gtuS2-23; Glycosyltransferase, family 2 (EC:2.4.1.-) Tax=RBG_16_RIF_WS3X_71_46_curated
Family 2 glycosyl transferase n=1 Tax=Streptomyces auratus AGR0001 RepID=J2K796_9ACTO id=5224820 bin=16ft_combo_ws3_JS1 species=Streptomyces auratus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Glycosyltransferase like family 2
13_1_40cm_3_scaffold_157_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20836..22032)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27910.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_157_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22352..25138)
DNA (2787bp) protein (929aa)
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aconitate hydratase 1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAI2_CHLAD rbh
aconitate hydratase 1
13_1_40cm_3_scaffold_157_21
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25135..25512)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEF5_GEOUR
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
13_1_40cm_3_scaffold_157_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25509..26018)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ83_ROSCS
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetyltransferase GCN5
13_1_40cm_3_scaffold_157_23
unknown

Not on your lists

26057..26422
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_3_scaffold_157_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(26432..28333)
DNA (1902bp) protein (634aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXH1_HERA2
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABX06891.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosi
13_1_40cm_3_scaffold_157_25
RLO_PLX_64_10, Bacteria

Not on your lists

28415..29446
DNA (1032bp) protein (344aa)
serine protease; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X9C0_9CHRO
13_1_40cm_3_scaffold_157_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29474..30703)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627544 bin=bin7_NC10_sister species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_157_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(30776..32437)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_157_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

32479..34371
DNA (1893bp) protein (631aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F2155D
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter
13_1_40cm_3_scaffold_157_29
unknown

Not on your lists

34428..34829
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_3_scaffold_157_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34819..35220)
DNA (402bp) protein (134aa)
Acyl dehydratase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS93_9EURY
MaoC domain protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AHG88199.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 93 in total

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