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13_1_40cm_3_scaffold_1693

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1693_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3..341
DNA (339bp) protein (113aa)
CoA-binding domain protein n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MU34_PYRCJ
CoA-binding domain protein
hypothetical protein; K06929 Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_1693_2
unknown

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474..824
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_3

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comp(928..2010)
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Z1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIE98703.1}; TaxID=1455976 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_06_C02.;"
hypothetical protein
13_1_40cm_3_scaffold_1693_4
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2013..3008)
DNA (996bp) protein (332aa)
Serine protease n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARI6_FERAC
serine protease
Serine protease {ECO:0000313|EMBL:AGO61798.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
13_1_40cm_3_scaffold_1693_5
unknown

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comp(3011..3316)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_6

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3456..3866
DNA (411bp) protein (137aa)
Putative transcriptional regulator, HxlR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG2_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AKA48552.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
transcriptional regulator, HxlR family
13_1_40cm_3_scaffold_1693_7

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comp(3872..4174)
DNA (303bp) protein (101aa)
Protein translation factor SUI1 homolog n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133I6 RepID=B3T3X9_9ARCH
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;"
translation initiation factor Sui1
13_1_40cm_3_scaffold_1693_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4194..4988)
DNA (795bp) protein (265aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_1693_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(4998..5387)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-G18 RepID=UPI00036EED8D
DoxX family protein; K15977 putative oxidoreductase Tax=RBG_16_Archaea_50_20_curated
DoxX family protein
13_1_40cm_3_scaffold_1693_10
unknown

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comp(5758..6585)
DNA (828bp) protein (276aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_11
CSP1_5_NC10, NC10, Bacteria

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comp(7498..7833)
DNA (336bp) protein (112aa)
dioxygenase, ferredoxin subunit id=14430310 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
dioxygenase, ferredoxin subunit Tax=CSP1_5_NC10
dioxygenase, ferredoxin subunit
13_1_40cm_3_scaffold_1693_12
unknown

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comp(7830..8465)
DNA (636bp) protein (212aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(8483..8857)
DNA (375bp) protein (125aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YGP2_METS5
ferredoxin Tax=RBG_16_Archaea_50_20_curated
4Fe-4S ferredoxin
13_1_40cm_3_scaffold_1693_14
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(8967..10274)
DNA (1308bp) protein (436aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCL3_9EURY
phosphopyruvate hydratase
13_1_40cm_3_scaffold_1693_15
unknown

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10428..10838
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_trna_1
unknown

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10902..11019
DNA (118bp)
transferRNA
13_1_40cm_3_scaffold_1693_16
unknown

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comp(11551..12483)
DNA (933bp) protein (311aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12449..13234)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1693_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(13227..15839)
DNA (2613bp) protein (871aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036A99B9
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
PKD domain containing protein
13_1_40cm_3_scaffold_1693_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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16075..16470
DNA (396bp) protein (132aa)
Flavin nucleotide binding protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_3_scaffold_1693_20
unknown

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comp(16571..16984)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_21

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17175..17561
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KFM15258.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
hypothetical protein id=14428582 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_3_scaffold_1693_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17729..18532
DNA (804bp) protein (268aa)
TRASH domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFJ2_9EURY
TRASH domain-containing protein {ECO:0000313|EMBL:ELZ20654.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_3_scaffold_1693_23
RBG_16_Archaea_50_20_curated, Archaea

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19169..19720
DNA (552bp) protein (184aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D3 RepID=B3T916_9ARCH
NADH-quinone oxidoreductase, B subunit
13_1_40cm_3_scaffold_1693_24
RBG_16_Archaea_50_20_curated, Archaea

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19717..20199
DNA (483bp) protein (161aa)
F420H2 dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ2_NITGG
13_1_40cm_3_scaffold_1693_25
RBG_16_Archaea_50_20_curated, Archaea

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20206..21351
DNA (1146bp) protein (382aa)
nuoD1; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE89_NITGG
13_1_40cm_3_scaffold_1693_26
RBG_16_Archaea_50_20_curated, Archaea

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21356..21826
DNA (471bp) protein (157aa)
NADH dehydrogenase subunit I (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
fpoI; 11-subunit complex, subunit I (EC:1.12.98.3)
NADH-quinone oxidoreductase, chain I n=3 Tax=Sulfolobus islandicus RepID=F0NIE8_SULIR
13_1_40cm_3_scaffold_1693_27
RBG_16_Archaea_50_20_curated, Archaea

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21833..23050
DNA (1218bp) protein (406aa)
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein; K00441 coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1] Tax=RBG_16_Archaea_50_20_curated
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFM5_9ARCH
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
13_1_40cm_3_scaffold_1693_28
unknown

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comp(23064..23711)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_3_scaffold_1693_29
unknown

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comp(24175..24276)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 30 items

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