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13_1_40cm_3_scaffold_1714

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1714_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..651)
DNA (651bp) protein (217aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_1714_2
unknown

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1347..2228
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_3_scaffold_1714_3
unknown

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2616..3923
DNA (1308bp) protein (436aa)

This feature has no annotations

13_1_40cm_3_scaffold_1714_4
unknown

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4029..4547
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_3_scaffold_1714_5
unknown

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4878..5561
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_3_scaffold_1714_6
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(5606..6868)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000371BA43
Family 2 glycosyl transferase {ECO:0000313|EMBL:EWG07444.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;
glycosyl transferase family protein
13_1_40cm_3_scaffold_1714_7
unknown

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6946..8265
DNA (1320bp) protein (440aa)

This feature has no annotations

13_1_40cm_3_scaffold_1714_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(8876..9340)
DNA (465bp) protein (155aa)
UPF0292 protein MTCT_0807 n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GHP2_METTF
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_1714_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(9351..10346)
DNA (996bp) protein (332aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_40cm_3_scaffold_1714_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(10322..10654)
DNA (333bp) protein (111aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1714_11

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comp(11151..11561)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000378E595
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S15
13_1_40cm_3_scaffold_1714_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(11620..12345)
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4P9_9ARCH
rpl2p; 50S ribosomal protein L2P; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Archaea_50_20_curated
rpl2p; 50S ribosomal protein L2
13_1_40cm_3_scaffold_1714_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12359..12628)
DNA (270bp) protein (90aa)
50S ribosomal protein L23P n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RL23_PYRHO
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L23
13_1_40cm_3_scaffold_1714_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(12629..13399)
DNA (771bp) protein (257aa)
50S ribosomal protein L4 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RCD6_METFO
50S ribosomal protein L4a; K02930 large subunit ribosomal protein L4e Tax=RBG_16_Archaea_50_20_curated
rpl4lp; 50S ribosomal protein L4P
13_1_40cm_3_scaffold_1714_15

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comp(13404..14408)
DNA (1005bp) protein (335aa)
50S ribosomal protein L3 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE66_ARCPA
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" so
50S ribosomal protein L3
13_1_40cm_3_scaffold_1714_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(14409..15263)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECE5_PYRF1
hypothetical protein; K09142 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1714_17
R_OP3X_45_16, OP3X, Bacteria

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15357..16403
DNA (1047bp) protein (349aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6G6_9EURY
bifunctional phosphoglucose/phosphomannose isomerase
13_1_40cm_3_scaffold_1714_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(16468..17955)
DNA (1488bp) protein (496aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA-splicing ligase RtcB n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCV4_9CREN
tRNA-splicing ligase RtcB
13_1_40cm_3_scaffold_1714_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18252..18458)
DNA (207bp) protein (69aa)
Putative archease protein family (DUF101/UPF0211) n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA3_NITGG
hypothetical protein
Protein archease {ECO:0000256|HAMAP-Rule:MF_01222}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitroso
13_1_40cm_3_scaffold_1714_20
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(19006..19776)
DNA (771bp) protein (257aa)
3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase {ECO:0000313|EMBL:AKG91110.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AKG91110.1};; EC=4.2.1.17 {ECO:0000313|EMBL:AKG91110.1};; TaxID=113653 species="Archaea
3-hydroxyacyl-CoA dehydrogenase (Hbd-5) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29143_ARCFU
hbd-5; 3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_3_scaffold_1714_21
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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19886..20707
DNA (822bp) protein (274aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
metal dependent phosphohydrolase
13_1_40cm_3_scaffold_1714_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(20763..21056)
DNA (294bp) protein (98aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_13_Bathyarchaeota_38_9_curated
nucleic acid binding OB-fold tRNA/helicase-type id=18248164 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
OB-fold nucleic acid binding protein
13_1_40cm_3_scaffold_1714_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21060..21446)
DNA (387bp) protein (129aa)
Deoxyribonuclease/rho motif-related TRAM domain containing protein
Deoxyribonuclease/rho motif-related TRAM domain containing protein {ECO:0000313|EMBL:AIC14554.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
deoxyribonuclease/rho motif-related TRAM id=5241628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_1714_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(21612..23840)
DNA (2229bp) protein (743aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Bathyarchaeota_38_9_curated
Valine--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX04_THEPD
valyl-tRNA synthetase
13_1_40cm_3_scaffold_1714_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(24154..25191)
DNA (1038bp) protein (346aa)
abortive infection protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_1714_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(25205..26410)
DNA (1206bp) protein (402aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_13_Bathyarchaeota_38_9_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDN0_DICT6
13_1_40cm_3_scaffold_1714_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(26500..27711)
DNA (1212bp) protein (404aa)
GTPase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9L7_9ARCH
GTP binding protein Tax=RBG_16_Bathyarchaeota_48_13_curated
GTPase
13_1_40cm_3_scaffold_1714_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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27961..28155
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037AA5F2
Marine sediment metagenome DNA, contig: S01H4_S18350 Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl38e; 50S ribosomal protein L38
13_1_40cm_3_scaffold_1714_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(28152..28469)
DNA (318bp) protein (106aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_1714_30
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(28462..29313)
DNA (852bp) protein (284aa)
ParB domain protein nuclease n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U2R6_THEAM
ParB domain-containing protein nuclease Tax=RBG_13_Bathyarchaeota_52_12_curated
ParB domain-containing protein nuclease
Displaying items 1-30 of 60 in total

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