ggKbase home page

13_1_40cm_3_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_194_1
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(269..793)
DNA (525bp) protein (175aa)
Marine sediment metagenome DNA, contig: S01H1_S41057 Tax=RBG_16_Bathyarchaeota_57_9_curated
13_1_40cm_3_scaffold_194_2
unknown

Not on your lists

comp(829..1098)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_3
unknown

Not on your lists

1442..2074
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2244..3104
DNA (861bp) protein (287aa)
Citrate transporter n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX20_MAHA5
putative transporter Tax=RBG_16_Euryarchaeota_68_12_curated
citrate transporter
13_1_40cm_3_scaffold_194_5
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

3200..3508
DNA (309bp) protein (103aa)
Citrate transporter n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UKE4_RUMA7
Citrate transporter Tax=RBG_13_Chloroflexi_53_26_curated
Citrate transporter
13_1_40cm_3_scaffold_194_6
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

3761..4432
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MMY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB64581.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
hypothetical protein
13_1_40cm_3_scaffold_194_7
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4441..5364
DNA (924bp) protein (308aa)
Sodium-dependent phosphate transporter n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MU78_9EURY
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:EQB66811.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatale
phosphate permease
13_1_40cm_3_scaffold_194_8
unknown

Not on your lists

5511..5984
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_9
unknown

Not on your lists

6193..6705
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

7028..8287
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAJ5_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_194_11
unknown

Not on your lists

8338..8475
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_12
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8434..8754)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFJ5_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16043.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" sour
13_1_40cm_3_scaffold_194_13
unknown

Not on your lists

comp(8867..9187)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_14

Not on your lists

comp(9398..10402)
DNA (1005bp) protein (335aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QLM5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKA49223.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
CorA family protein
13_1_40cm_3_scaffold_194_15
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

10965..11993
DNA (1029bp) protein (343aa)
Isoleucine--tRNA ligase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZJM9_9CREN
Isoleucyl-tRNA synthase {ECO:0000313|EMBL:AKG38124.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
hypothetical protein
13_1_40cm_3_scaffold_194_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

12643..14079
DNA (1437bp) protein (479aa)
Isoleucine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECE1_PYRF1
isoleucyl-tRNA synthetase Tax=RBG_16_Bathyarchaeota_48_13_curated
ileS; isoleucyl-tRNA synthetase
13_1_40cm_3_scaffold_194_17
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14155..14637
DNA (483bp) protein (161aa)
Histidine triad (HIT) family hydrolase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FS6_GEOSL
histidine triad (HIT) protein Tax=GWB2_Geobacteraceae_52_12_curated
histidine triad (HIT) family hydrolase
13_1_40cm_3_scaffold_194_18
unknown

Not on your lists

14699..16507
DNA (1809bp) protein (603aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16614..18323
DNA (1710bp) protein (570aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000379BBEA
frdA; fumarate reductase flavoprotein subunit frdA
13_1_40cm_3_scaffold_194_20

Not on your lists

18327..19073
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Putative fumarate reductase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:AKA59474.1}; TaxID=1630016 species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
13_1_40cm_3_scaffold_194_21
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19075..19470
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=13 Tax=Actinobacillus pleuropneumoniae RepID=A3N2H5_ACTP2
fumarate reductase subunit C; K00246 fumarate reductase subunit C Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
frdC; fumarate reductase subunit C
13_1_40cm_3_scaffold_194_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19467..19886
DNA (420bp) protein (140aa)
fumarate reductase subunit D; K00247 fumarate reductase subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_194_23
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20030..20401
DNA (372bp) protein (124aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=391009 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Ther
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LP99_THEM4
alkylhydroperoxidase
13_1_40cm_3_scaffold_194_24
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

20768..21544
DNA (777bp) protein (259aa)
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TUX5_METKA
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AAM02840.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyr
13_1_40cm_3_scaffold_194_25
unknown

Not on your lists

comp(21557..21967)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_194_26
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21971..22432)
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:CCJ35050.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
13_1_40cm_3_scaffold_194_27
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

22533..23243
DNA (711bp) protein (237aa)
Haloacid dehalogenase domain protein hydrolase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TCU5_ACIB4
Haloacid dehalogenase domain protein hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ADD08380.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469
13_1_40cm_3_scaffold_194_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23288..24115)
DNA (828bp) protein (276aa)
NIFsuperfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC27_NITGG
NIF superfamily domain-containing protein
NIF superfamily domain-containing protein {ECO:0000313|EMBL:AIC15593.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_194_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(24152..25558)
DNA (1407bp) protein (469aa)
fumarase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] Tax=CSP1_2_Dadabacteria
fumarase (EC:4.2.1.2)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003796A3B
13_1_40cm_3_scaffold_194_30
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25928..26872
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000375034C
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
fumarylacetoacetate hydrolase family protein
Displaying items 1-30 of 50 in total

View Taxonomy