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13_1_40cm_3_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_218_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..399
DNA (399bp) protein (133aa)
Peptidase M50 n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH38_GEOOG
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADB75031.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC
13_1_40cm_3_scaffold_218_2
unknown

Not on your lists

396..872
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_3
unknown

Not on your lists

962..1162
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_4
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1152..1964
DNA (813bp) protein (271aa)
Patatin n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WZT1_MYCKA
Patatin {ECO:0000313|EMBL:ETW21677.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
patatin
13_1_40cm_3_scaffold_218_5
unknown

Not on your lists

2035..2214
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2440..3189)
DNA (750bp) protein (250aa)
Putative transmembrane anti-sigma factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA1_SPHTD
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACZ40744.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphae
13_1_40cm_3_scaffold_218_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3182..3685)
DNA (504bp) protein (168aa)
RNA polymerase sigma factor n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF0_RUBXD
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
13_1_40cm_3_scaffold_218_8
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3759..4691)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000382985A
Uncharacterized protein {ECO:0000313|EMBL:KJE76434.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium ac
hypothetical protein
13_1_40cm_3_scaffold_218_9
unknown

Not on your lists

4867..5121
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

5188..5913
DNA (726bp) protein (242aa)
YceI-like domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EUR8_9ACTO
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_3_scaffold_218_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5910..6812)
DNA (903bp) protein (301aa)
proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_RIF_CHLX_73_18_curated
L-proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase id=4924569 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_3_scaffold_218_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6824..8074)
DNA (1251bp) protein (417aa)
Threonine synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1V4_SPHTD
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ACZ38221.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sp
13_1_40cm_3_scaffold_218_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8087..8341)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000360193B
Uncharacterized protein {ECO:0000313|EMBL:GAO38487.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
13_1_40cm_3_scaffold_218_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8390..9223)
DNA (834bp) protein (278aa)
Ribonuclease BN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W0_CONWI
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ADB54241.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (str
13_1_40cm_3_scaffold_218_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9280..9834
DNA (555bp) protein (185aa)
30S ribosomal protein S2 n=1 Tax=Bacillus sp. CPSM8 RepID=V7Q854_9BACI
PA-phosphatase-like phosphoesterase
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACV76796.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (
13_1_40cm_3_scaffold_218_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9957..10433
DNA (477bp) protein (159aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
13_1_40cm_3_scaffold_218_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10443..10820)
DNA (378bp) protein (126aa)
response regulator receiver protein id=14430354 bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator receiver protein Tax=CSP1_5_NC10
PAS sensor protein
13_1_40cm_3_scaffold_218_18
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10817..13435)
DNA (2619bp) protein (873aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Broc
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IJN9_9PLAN
Signal transduction histidine kinase
13_1_40cm_3_scaffold_218_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13446..14405)
DNA (960bp) protein (320aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14428720 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver modulated metal dependent phosphohydrolase
13_1_40cm_3_scaffold_218_20
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14683..15975)
DNA (1293bp) protein (431aa)
Transcriptional regulator, XRE family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF87_9CHLR
XRE family transcriptional regulator Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_1_40cm_3_scaffold_218_21
unknown

Not on your lists

comp(16140..16235)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_22
unknown

Not on your lists

comp(16267..16614)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_23
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16687..18900
DNA (2214bp) protein (738aa)
Two-component hybrid sensor and histidine kinase regulator (EC:2.7.13.3)
Two-component hybrid sensor and histidine kinase regulator {ECO:0000313|EMBL:CCG02701.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCG02701.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilale
Two-component hybrid sensor and histidine kinase regulator n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP40_BLASD
13_1_40cm_3_scaffold_218_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18906..19343
DNA (438bp) protein (146aa)
Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D057_9BACT
Histidine kinase {ECO:0000313|EMBL:EDY20371.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
response regulator receiver modulated diguanylate phosphodiesterase
13_1_40cm_3_scaffold_218_25
unknown

Not on your lists

comp(19336..19743)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_218_26
unknown

Not on your lists

comp(19743..20828)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000365D606
13_1_40cm_3_scaffold_218_27
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20851..22197)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Therm
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJE5_MOOTA
periplasmic sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_218_28
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(22198..22866)
DNA (669bp) protein (223aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVA7_ACIC1
OmpR family two-component response regulator Tax=RBG_16_Chloroflexi_64_43_curated
winged helix family two component transcriptional regulator
13_1_40cm_3_scaffold_218_29
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22909..23202
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628D3F
membrane protein
Membrane protein {ECO:0000313|EMBL:AIJ21860.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_1_40cm_3_scaffold_218_30
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(23190..24320)
DNA (1131bp) protein (377aa)
major facilitator superfamily protein Tax=RBG_16_Chloroflexi_57_8_curated
Arabinose efflux permease id=24433603 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
major facilitator superfamily protein
Displaying items 1-30 of 71 in total

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