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13_1_40cm_3_scaffold_2053

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2053_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

623..859
DNA (237bp) protein (79aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YQ58_9ACTO
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_3_scaffold_2053_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

867..2303
DNA (1437bp) protein (479aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
13_1_40cm_3_scaffold_2053_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2467..3333
DNA (867bp) protein (289aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW5_SORC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2053_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3393..4424
DNA (1032bp) protein (344aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_1_40cm_3_scaffold_2053_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4641..5408
DNA (768bp) protein (256aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14623558 bin=bin5_DeltaP species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Dienelactone hydrolase-related enzyme
13_1_40cm_3_scaffold_2053_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..6691)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F09CA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46686.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_40cm_3_scaffold_2053_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

6720..7982
DNA (1263bp) protein (421aa)
Serine/threonine protein phosphatase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIN9_CORCM
membrane protein Tax=RBG_16_Nitrospirae_64_22_curated
yaeI; serine/threonine protein phosphatase
13_1_40cm_3_scaffold_2053_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7984..8451)
DNA (468bp) protein (156aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_2053_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8619..9713
DNA (1095bp) protein (365aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_2053_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9934..10320
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TU68_MARTH
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_2053_11
unknown

Not on your lists

comp(10314..10628)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_2053_12
unknown

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10802..11557
DNA (756bp) protein (252aa)

This feature has no annotations

13_1_40cm_3_scaffold_2053_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11418..12479)
DNA (1062bp) protein (354aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_1_40cm_3_scaffold_2053_14
unknown

Not on your lists

12571..13011
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_3_scaffold_2053_15
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12995..13729
DNA (735bp) protein (245aa)
Glycosyl transferase family 2 n=2 Tax=Desulfovibrio vulgaris RepID=E3ISE2_DESVR
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP87056.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desu
13_1_40cm_3_scaffold_2053_16
unknown

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13726..14064
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_2053_17
unknown

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14093..14917
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_3_scaffold_2053_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14936..15994
DNA (1059bp) protein (353aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
13_1_40cm_3_scaffold_2053_19
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(16020..18032)
DNA (2013bp) protein (671aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY58328.1}; EC=3.4.19.1 {ECO:0000313|EMBL:AGY58328.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria;
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHI7_9CYAN
13_1_40cm_3_scaffold_2053_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18120..19049
DNA (930bp) protein (310aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
13_1_40cm_3_scaffold_2053_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19043..19810
DNA (768bp) protein (256aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
13_1_40cm_3_scaffold_2053_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19807..20508
DNA (702bp) protein (234aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=379066 species="Bacteria; Gemm
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
13_1_40cm_3_scaffold_2053_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20531..20938
DNA (408bp) protein (136aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_Gemmatimonade
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
13_1_40cm_3_scaffold_2053_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

20935..21477
DNA (543bp) protein (181aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RBG_16_RIF_WS3X_71_46_curated
Argininosuccinate lyase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=ARLY_ROSCS id=5225765 bin=16ft_combo_ws3_JS1 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
bifunctional argininosuccinate lyase/N-acetylglutamate synthase
13_1_40cm_3_scaffold_2053_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21548..22213
DNA (666bp) protein (222aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isochorismatase hydrolase id=5800721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
13_1_40cm_3_scaffold_2053_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22210..23310
DNA (1101bp) protein (367aa)
Transaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S4_GEMAT
transaminase Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase class V
13_1_40cm_3_scaffold_2053_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23307..24902
DNA (1596bp) protein (532aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SIQ4_9ZZZZ
D-3-phosphoglycerate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_2053_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24899..25930)
DNA (1032bp) protein (344aa)
id=12554872 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_3_scaffold_2053_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25930..27552)
DNA (1623bp) protein (541aa)
Chemotaxis sensory transducer n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TQS1_9FIRM
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis sensory transducer with Cache sensor
13_1_40cm_3_scaffold_2053_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


28031..30445
DNA (2415bp) protein (805aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Leucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q0_GEMAT
leucyl-tRNA synthetase class Ia
Displaying items 1-30 of 36 in total

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