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13_1_40cm_3_scaffold_2407

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2407_1
unknown

Not on your lists

284..523
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_2
unknown

Not on your lists

536..853
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1200..2645
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035F3880
DNA uptake lipoprotein-like protein; K05807 putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DNA uptake lipoprotein-like protein
13_1_40cm_3_scaffold_2407_4
unknown

Not on your lists

comp(2697..2804)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_5
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2901..4532
DNA (1632bp) protein (544aa)
Response regulator id=4192120 bin=GWC2_Deltaproteobacteria_55_46 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
response regulator Tax=GWC2_Deltaproteobacteria_55_46b_curated
response regulator
13_1_40cm_3_scaffold_2407_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


4720..7434
DNA (2715bp) protein (905aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Valine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVG3_KORVE
valyl-tRNA synthetase
13_1_40cm_3_scaffold_2407_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7457..8389
DNA (933bp) protein (311aa)
nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC:2.4.2.19) Tax=RBG_16_Nitrospirae_64_22_curated
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZU3_RUBXD
13_1_40cm_3_scaffold_2407_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8423..9184
DNA (762bp) protein (254aa)
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVG0_KORVE
biotin--acetyl-CoA-carboxylase ligase
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
13_1_40cm_3_scaffold_2407_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9127..9372
DNA (246bp) protein (82aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RIFCSPLOWO2_02_FULL_Acidobacteri
13_1_40cm_3_scaffold_2407_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9373..9942
DNA (570bp) protein (190aa)
pantothenate kinase; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Type III pantothenate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=COAX_KORVE
pantothenate kinase
13_1_40cm_3_scaffold_2407_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9882..10163
DNA (282bp) protein (94aa)
pantothenate kinase; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
pantothenate kinase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000382A37B
pantothenate kinase
13_1_40cm_3_scaffold_2407_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

10228..10950
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWL2_GRAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_3_scaffold_2407_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

11044..12351
DNA (1308bp) protein (436aa)
(Uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF7_KORVE
(uracil-5)-methyltransferase
13_1_40cm_3_scaffold_2407_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12348..13655
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6E0F4
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
comEC; ComE operon protein 3
13_1_40cm_3_scaffold_2407_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

14202..14954
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003757301
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
beta-lactamase-like protein
13_1_40cm_3_scaffold_2407_16
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(14907..15464)
DNA (558bp) protein (186aa)
hypothetical protein id=16847096 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
S-isoprenylcysteine methyltransferase-like protein
13_1_40cm_3_scaffold_2407_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15461..16477)
DNA (1017bp) protein (339aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Glycosyl transferase family 9 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V1D6_TERSS
glycosyl transferase family protein
13_1_40cm_3_scaffold_2407_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16470..16961)
DNA (492bp) protein (164aa)
cytidyltransferase-related domain-containing protein id=12555681 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytidyltransferase-related domain-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
cytidyltransferase-related domain-containing protein
13_1_40cm_3_scaffold_2407_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16965..18023)
DNA (1059bp) protein (353aa)
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase {ECO:0000313|EMBL:CDM65985.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Py
PfkB domain protein id=4143312 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase-like domain-containing protein
13_1_40cm_3_scaffold_2407_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18020..18589)
DNA (570bp) protein (190aa)
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:CDM65986.1}; EC=3.1.3.82 {ECO:0000313|EMBL:CDM65986.1};; EC=3.1.3.83 {ECO:0000313|EMBL:CDM65986.1};; TaxID=454194 species="Bacteria; A
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC24_DESAR
histidinol-phosphate phosphatase
13_1_40cm_3_scaffold_2407_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19571..20578)
DNA (1008bp) protein (336aa)
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZ84_DESOH
tetraacyldisaccharide 4'-kinase
13_1_40cm_3_scaffold_2407_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20575..21948)
DNA (1374bp) protein (458aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Three-deoxy-D-manno-octulosonic-acid transferase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD3_KORVE
3-deoxy-D-manno-octulosonic-acid transferase
13_1_40cm_3_scaffold_2407_23
unknown

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22044..22319
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_24
unknown

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comp(22325..22564)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_25
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

22784..25045
DNA (2262bp) protein (754aa)
ATP-dependent DNA helicase Rep; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ATP-dependent DNA helicase, Rep family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029V8_SOLUE
ATP-dependent DNA helicase Rep
13_1_40cm_3_scaffold_2407_26
unknown

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comp(25233..25460)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_3_scaffold_2407_27
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

25557..26729
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003776A9D
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ABJ82169.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_1_40cm_3_scaffold_2407_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26742..27599
DNA (858bp) protein (286aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=14430002 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_2407_29
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

27538..28608
DNA (1071bp) protein (357aa)
adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036745EF
adenosine deaminase
13_1_40cm_3_scaffold_2407_30
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

28639..28881
DNA (243bp) protein (81aa)
phosphoribosylformylglycinamidine synthetase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Phosphoribosylformylglycinamidine synthetase PurS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ9_KORVE
phosphoribosylformylglycinamidine synthase subunit PurS
Displaying items 1-30 of 32 in total

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