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13_1_40cm_3_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_258_1
unknown

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_3_scaffold_258_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(160..1290)
DNA (1131bp) protein (377aa)
Tetratricopeptide TPR_2 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR78_METH6
TPR-repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Tetratricopeptide TPR_2
13_1_40cm_3_scaffold_258_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1390..2724
DNA (1335bp) protein (445aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGV2_TERRK
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
13_1_40cm_3_scaffold_258_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2775..3398
DNA (624bp) protein (208aa)
molybdopterin-binding oxidoreductase; K07147 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
molybdopterin-binding oxidoreductase; K07147 id=24426889 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
oxidoreductase molybdopterin binding protein
13_1_40cm_3_scaffold_258_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3355..4038)
DNA (684bp) protein (228aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Octanoyltransferase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=LIPB_GLOVI
lipB; lipoyltransferase
13_1_40cm_3_scaffold_258_6
unknown

Not on your lists

comp(4035..4454)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_3_scaffold_258_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4451..5842)
DNA (1392bp) protein (464aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C7_GEMAT
dihydrolipoamide dehydrogenase
13_1_40cm_3_scaffold_258_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5962..7254)
DNA (1293bp) protein (431aa)
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate dehydrogenase E2 component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D0_GEMAT
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_1_40cm_3_scaffold_258_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7257..8240)
DNA (984bp) protein (328aa)
pdhB; pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D1_GEMAT
Transketolase central region
13_1_40cm_3_scaffold_258_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8244..9242)
DNA (999bp) protein (333aa)
pdhA; pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D2_GEMAT
pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit
13_1_40cm_3_scaffold_258_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9255..10142)
DNA (888bp) protein (296aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D3_GEMAT
13_1_40cm_3_scaffold_258_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10192..11199)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G5_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_258_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11233..12345)
DNA (1113bp) protein (371aa)
glycine oxidase (EC:1.4.3.19)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EBC710
glycine oxidase ThiO Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_258_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12424..12642
DNA (219bp) protein (73aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_258_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12639..13613)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6D2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_258_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13610..15127)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
glycosyl transferase family 2
13_1_40cm_3_scaffold_258_17
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15139..16194)
DNA (1056bp) protein (352aa)
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase {ECO:0000313|EMBL:EMR04076.1}; EC=2.4.1.57 {ECO:0000313|EMBL:EMR04076.1};; TaxID=1279009 species="Bacteria; Bac
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NA44_9BACT
glycosyl transferase family protein
13_1_40cm_3_scaffold_258_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16197..18101)
DNA (1905bp) protein (635aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL60_ROSCS
13_1_40cm_3_scaffold_258_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18145..18852
DNA (708bp) protein (236aa)
Uncharacterized protein (Fragment) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNI8_9BACT
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_258_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18925..19347)
DNA (423bp) protein (141aa)
Fis family transcriptional regulator n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B0E0
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Fis family transcriptional regulator
13_1_40cm_3_scaffold_258_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19349..20050)
DNA (702bp) protein (234aa)
peptidase C26; K07010 putative glutamine amidotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted glutamine amidotransferases
13_1_40cm_3_scaffold_258_22
unknown

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comp(20047..20466)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_3_scaffold_258_23
unknown

Not on your lists

comp(20543..21001)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_3_scaffold_258_24
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21011..23203)
DNA (2193bp) protein (731aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG70_RHOMR rbh
Iron complex outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWA2_Ignavibacteria_54_16_curated
TonB-dependent receptor plug
13_1_40cm_3_scaffold_258_25
unknown

Not on your lists

comp(23200..23724)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_3_scaffold_258_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24016..24507
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_258_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24511..25494
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS8_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47038.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
13_1_40cm_3_scaffold_258_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25590..25985
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TC10_9CYAN
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_258_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25985..27316
DNA (1332bp) protein (444aa)
Amino acid/peptide transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C32_SOLUE
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
amino acid/peptide transporter
13_1_40cm_3_scaffold_258_30

Not on your lists

comp(28007..30115)
DNA (2109bp) protein (703aa)
Peptidase S9 prolyl oligopeptidase n=1 Tax=uncultured bacterium 89 RepID=E3T696_9BACT rbh
Peptidase S9 prolyl oligopeptidase {ECO:0000313|EMBL:ADC35840.1}; TaxID=698393 species="Bacteria; environmental samples.;" source="uncultured bacterium 89.;"
peptidase S9 prolyl oligopeptidase
Displaying items 1-30 of 64 in total

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