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13_1_40cm_3_scaffold_2602

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2602_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..1260
DNA (1260bp) protein (420aa)
dnaE1; DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX2_SOLUE
13_1_40cm_3_scaffold_2602_2
unknown

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comp(1245..1604)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_3_scaffold_2602_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2158..2562
DNA (405bp) protein (135aa)
putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative lipoprotein id=14625651 bin=bin7_NC10_sister species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_3_scaffold_2602_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2620..4113)
DNA (1494bp) protein (498aa)
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=14625649 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
13_1_40cm_3_scaffold_2602_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4117..4872)
DNA (756bp) protein (252aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase (6PGL) id=3814683 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_2602_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4880..6325)
DNA (1446bp) protein (482aa)
carbohydrate kinase FGGY; K00851 gluconokinase [EC:2.7.1.12] Tax=GWA2_Rokubacteria_73_35_curated
carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12] id=14627818 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
carbohydrate kinase
13_1_40cm_3_scaffold_2602_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6344..6562
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3814680 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_2602_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6949..7875)
DNA (927bp) protein (309aa)
hypothetical protein; K03298 drug/metabolite transporter, DME family Tax=GWA2_Rokubacteria_73_35_curated
Membrane protein, putative id=4365892 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_3_scaffold_2602_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7936..8838
DNA (903bp) protein (301aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3261976 bin=GWA2_Methylomirabilis_73_35 species=Rhipicephalus pulchellus genus=Rhipicephalus taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyisobutyrate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_3_scaffold_2602_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8893..9210
DNA (318bp) protein (106aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=14626792 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
13_1_40cm_3_scaffold_2602_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9207..9677
DNA (471bp) protein (157aa)
Fe-S-cluster-containing hydrogenase components 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase id=14626791 bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase
13_1_40cm_3_scaffold_2602_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9677..11002
DNA (1326bp) protein (442aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_3_scaffold_2602_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10999..12945
DNA (1947bp) protein (649aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_1_40cm_3_scaffold_2602_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13093..13977
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-hydroxy-3-oxopropionate reductase id=4931803 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
13_1_40cm_3_scaffold_2602_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13974..15008
DNA (1035bp) protein (345aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative acetyltransferase id=4737960 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
GCN5-related N-acetyltransferase
13_1_40cm_3_scaffold_2602_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15008..15367
DNA (360bp) protein (120aa)
Copper resistance protein CopC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Copper resistance protein, copC family id=4737956 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC
13_1_40cm_3_scaffold_2602_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15411..15650
DNA (240bp) protein (80aa)
Predicted protein id=2216088 bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
NADP-dependent oxidoreductase domain protein
13_1_40cm_3_scaffold_2602_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15702..16505
DNA (804bp) protein (268aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Predicted protein id=2216088 bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADP-dependent oxidoreductase domain protein
13_1_40cm_3_scaffold_2602_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16786..17535
DNA (750bp) protein (250aa)
mce; methylmalonyl-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lactoylglutathione lyase and related lyases id=2216086 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methylmalonyl-CoA epimerase
13_1_40cm_3_scaffold_2602_20
unknown

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17910..18149
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_3_scaffold_2602_21
unknown

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18322..18843
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_3_scaffold_2602_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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18946..20541
DNA (1596bp) protein (532aa)
alkaline phosphatase; K01113 alkaline phosphatase D [EC:3.1.3.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Alkaline phosphatase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HNM8_CYAP4 rbh
alkaline phosphatase
13_1_40cm_3_scaffold_2602_23
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

20729..22117
DNA (1389bp) protein (463aa)
Cobalamin B12-binding/Radical SAM family protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0INJ4_LEPFC
cobalamin B12-binding/Radical SAM family protein
Cobalamin B12-binding/Radical SAM family protein {ECO:0000313|EMBL:BAM06843.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum fe
13_1_40cm_3_scaffold_2602_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22139..22483
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=4935528 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_3_scaffold_2602_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22480..22950
DNA (471bp) protein (157aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4141959 bin=GWA2_Methylomirabilis_73_35 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glyoxalase/bleomycin resistance protein/dioxygenase Tax=GWA2_Rokubacteria_73_35_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_2602_26
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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23177..24586
DNA (1410bp) protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW99_9BACT
transcriptional regulatory protein pilR Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
transcriptional regulatory protein pilR
13_1_40cm_3_scaffold_2602_27
unknown

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comp(25052..25414)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_3_scaffold_2602_28
unknown

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25747..26199
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_3_scaffold_2602_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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26941..27627
DNA (687bp) protein (229aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8D145_GEOTC
Uncharacterized protein {ECO:0000313|EMBL:ETW96301.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_3_scaffold_2602_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27465..27842)
DNA (378bp) protein (126aa)
amidohydrolase 2 id=4217943 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2 Tax=GWC2_Rokubacteria_70_16_curated
amidohydrolase 2
Displaying items 1-30 of 31 in total

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