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13_1_40cm_3_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_300_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..385)
DNA (384bp) protein (128aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_300_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(378..1532)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=7201343 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
13_1_40cm_3_scaffold_300_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1536..4235)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A890_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_300_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4843..6273)
DNA (1431bp) protein (477aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
cheA; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A888_GEMAT
13_1_40cm_3_scaffold_300_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6264..6716)
DNA (453bp) protein (151aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3); K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
cheA; Chemotaxis protein CheA (EC:2.7.13.3)
Two-component system, chemotaxis family, sensor kinase CheA n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum NAU-B3 RepID=U4PUB1_BACAM
13_1_40cm_3_scaffold_300_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6719..7081)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY homolog n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A887_GEMAT
chemotaxis protein CheY homolog; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
response regulator receiver
13_1_40cm_3_scaffold_300_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7091..7546)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FCA1A5
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RBG_16_Gemmatimonadetes_66_8_curated
cheW-15; chemotaxis protein CheW
13_1_40cm_3_scaffold_300_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7539..8549)
DNA (1011bp) protein (337aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT
13_1_40cm_3_scaffold_300_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8549..9064)
DNA (516bp) protein (172aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipoprotein signal peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A883_GEMAT
Lipoprotein signal peptidase
13_1_40cm_3_scaffold_300_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9048..9467)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A882_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_300_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9467..12622)
DNA (3156bp) protein (1052aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A881_GEMAT
13_1_40cm_3_scaffold_300_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12622..13428)
DNA (807bp) protein (269aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A880_GEMAT
13_1_40cm_3_scaffold_300_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13425..13898)
DNA (474bp) protein (158aa)
Septum site-determining protein DivIVA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A879_GEMAT
divIVA; septum site-determining protein DivIVA; K04074 cell division initiation protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function UPF0001
13_1_40cm_3_scaffold_300_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13895..14668)
DNA (774bp) protein (258aa)
Pyridoxal phosphate-dependent enzyme n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LTZ3_THEPS
alanine racemase domain-containing protein; K06997 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UPF0001
13_1_40cm_3_scaffold_300_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14741..15562)
DNA (822bp) protein (274aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A876_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Conserved hypothetical protein CHP00159
13_1_40cm_3_scaffold_300_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15538..16704)
DNA (1167bp) protein (389aa)
Dihydropteroate synthase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AR90_PELPD
dihydropteroate synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dihydropteroate synthase
13_1_40cm_3_scaffold_300_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16701..18686)
DNA (1986bp) protein (662aa)
ftsH; ATP-dependent protease FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ftsH; ATP-dependent protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT rbh
13_1_40cm_3_scaffold_300_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18687..19241)
DNA (555bp) protein (185aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_1_40cm_3_scaffold_300_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19198..20556)
DNA (1359bp) protein (453aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TILS_SYMTH
cell cycle protein
13_1_40cm_3_scaffold_300_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20606..21199
DNA (594bp) protein (198aa)
flavin reductase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14424636 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
flavin reductase domain-containing protein
13_1_40cm_3_scaffold_300_21
unknown

Not on your lists

comp(21234..22805)
DNA (1572bp) protein (524aa)

This feature has no annotations

13_1_40cm_3_scaffold_300_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22913..24268
DNA (1356bp) protein (452aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
13_1_40cm_3_scaffold_300_23
RLO_PLX_64_10, Bacteria

Not on your lists

comp(24550..25494)
DNA (945bp) protein (315aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_3_scaffold_300_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25654..25953)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNN1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34174.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_3_scaffold_300_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25992..26345)
DNA (354bp) protein (118aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EU33_SORC5
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:CAN91063.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorang
13_1_40cm_3_scaffold_300_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(26352..26804)
DNA (453bp) protein (151aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_3_scaffold_300_27
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26900..27829
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363EED9 rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ETY82178.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bu
helix-turn-helix domain protein
13_1_40cm_3_scaffold_300_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28138..29529
DNA (1392bp) protein (464aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein kinase n=2 Tax=Chloroflexus RepID=A9WG03_CHLAA
TPR repeat-containing serine/threonine protein kinase
13_1_40cm_3_scaffold_300_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29666..30721
DNA (1056bp) protein (352aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_300_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

30893..31318
DNA (426bp) protein (142aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 36 in total

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