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13_1_40cm_3_scaffold_302

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_302_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_302_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(216..1193)
DNA (978bp) protein (326aa)
Antibiotic transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX0_9BACT
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
putative ABC transporter ATP-binding protein
13_1_40cm_3_scaffold_302_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1273..2742)
DNA (1470bp) protein (490aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon GZfos24D9 RepID=Q64C96_9ARCH
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_302_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2964..4088)
DNA (1125bp) protein (375aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Lhr-like helicase (EC:3.6.4.-)
ATP-dependent helicase n=1 Tax=uncultured archaeon RepID=Q6MZB0_9ARCH
13_1_40cm_3_scaffold_302_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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4257..4616
DNA (360bp) protein (120aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridiales RepID=B0NE98_CLOSV
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
PadR-like family transcriptional regulator
13_1_40cm_3_scaffold_302_6
unknown

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4701..5363
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_3_scaffold_302_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5483..6175
DNA (693bp) protein (231aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_40cm_3_scaffold_302_8
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6193..6732
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
13_1_40cm_3_scaffold_302_9
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(6864..7529)
DNA (666bp) protein (222aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKR9_THEBM
ribonuclease HII
13_1_40cm_3_scaffold_302_10
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(7517..8101)
DNA (585bp) protein (195aa)
Nucleoside-triphosphatase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796}; Short=NTPase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000255|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosph
Nucleoside-triphosphatase THEP1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
13_1_40cm_3_scaffold_302_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8068..8706)
DNA (639bp) protein (213aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RLME_METTH
cell division protein J
13_1_40cm_3_scaffold_302_12
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists


comp(8722..9063)
DNA (342bp) protein (114aa)
Methionine--tRNA ligase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WRG8_KYRT2
methionyl-tRNA synthetase; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
methionyl-tRNA synthetase
13_1_40cm_3_scaffold_302_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9105..10379)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P0_SPHTD
peptidase M16 domain-containing protein
13_1_40cm_3_scaffold_302_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(10369..11715)
DNA (1347bp) protein (449aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B202_HERA2
peptidase M16 domain-containing protein
13_1_40cm_3_scaffold_302_15
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

Not on your lists

comp(11712..12314)
DNA (603bp) protein (201aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_40cm_3_scaffold_302_16
RBG_16_Archaea_50_20_curated, Archaea

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12432..15650
DNA (3219bp) protein (1073aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U6A3_9EURY
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_302_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(15944..16714)
DNA (771bp) protein (257aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWL2_METMJ
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase
13_1_40cm_3_scaffold_302_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16722..18269)
DNA (1548bp) protein (516aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ38_PETMO
13_1_40cm_3_scaffold_302_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18320..19894)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_1_40cm_3_scaffold_302_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20008..20928)
DNA (921bp) protein (307aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003721FA4
imidazolonepropionase
13_1_40cm_3_scaffold_302_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(21300..22328)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_302_22
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(22559..23644)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Bacillus sp. 95MFCvi2.1 RepID=UPI00037B5A3D
Nitroreductase {ECO:0000313|EMBL:EEM86226.1}; TaxID=527028 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar pu
SagB-type dehydrogenase domain protein
13_1_40cm_3_scaffold_302_23

Not on your lists

comp(24051..24518)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_3_scaffold_302_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(24515..25210)
DNA (696bp) protein (232aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3TFT1_9CREN
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
fibrillarin
13_1_40cm_3_scaffold_302_25
unknown

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25411..25737
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_302_26
unknown

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25809..26081
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_3_scaffold_302_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

26564..27403
DNA (840bp) protein (280aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrD; dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
UPI0003D1C5C0 related cluster n=1 Tax=unknown RepID=UPI0003D1C5C0
13_1_40cm_3_scaffold_302_28
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(27581..27787)
DNA (207bp) protein (69aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
GAF domain-containing protein
GAF domain protein {ECO:0000313|EMBL:ACM05437.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 275
13_1_40cm_3_scaffold_302_29
RBG_16_Archaea_50_20_curated, Archaea

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28074..29678
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_302_30
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29761..31335
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q21_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40222.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
Displaying items 1-30 of 38 in total

View Taxonomy