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13_1_40cm_3_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_355_1
unknown

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148..1203)
DNA (1056bp) protein (352aa)
Possible streptogramin lyase, gluconolactonase family protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z1T3_9ALTE
lyase -like protein Tax=GWC2_Geobacteraceae_58_44_curated
lyase -like protein
13_1_40cm_3_scaffold_355_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1423..2277
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DC0400 rbh
Xylanase {ECO:0000313|EMBL:EPX62735.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscu
esterase
13_1_40cm_3_scaffold_355_4
unknown

Not on your lists

comp(2441..3004)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_5
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3010..3729
DNA (720bp) protein (240aa)
Site-specific recombinase XerD n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z7C4_9GAMM
Site-specific recombinase XerD {ECO:0000313|EMBL:EIC19840.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibr
recombinase XerD
13_1_40cm_3_scaffold_355_6
unknown

Not on your lists

3722..4408
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_7
unknown

Not on your lists

4583..5131
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_8
unknown

Not on your lists

5118..5618
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_9
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5641..6663
DNA (1023bp) protein (341aa)
Prophage LambdaMc01, DNA primase, P4 family n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603Z8_METCA
hypothetical protein
Prophage LambdaMc01, DNA primase, P4 family {ECO:0000313|EMBL:AAU91228.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" sour
13_1_40cm_3_scaffold_355_10
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6747..7019
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=4213175 bin=GWF2_Planctomycetes_42_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Putative uncharacterized protein Tax=GWF2_Planctomycetes_42_9_curated
13_1_40cm_3_scaffold_355_11
unknown

Not on your lists

7027..7656
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_12
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7717..8238
DNA (522bp) protein (174aa)
UvrD/REP helicase n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EP11_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:KIJ79733.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides V
13_1_40cm_3_scaffold_355_13
unknown

Not on your lists

comp(8331..8474)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_3_scaffold_355_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8474..9787)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031A5E0F rbh
amidohydrolase; K07047 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Amidohydrolase 3
13_1_40cm_3_scaffold_355_15

Not on your lists

comp(10110..11468)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZZ9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00508.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_3_scaffold_355_16

Not on your lists

comp(11489..11980)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZZ8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00507.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_3_scaffold_355_17

Not on your lists

comp(11977..14115)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZZ7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI00506.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome c class I
13_1_40cm_3_scaffold_355_18
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14105..14812)
DNA (708bp) protein (236aa)
Putative Cytochrome bc1 complex, cytochrome b6 subunit id=1775181 bin=GWA2_Ignavibacteria_55_11 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
menaquinol-cytochrome c reductase cytochrome b subunit Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
menaquinol-cytochrome c reductase cytochrome b subunit
13_1_40cm_3_scaffold_355_19
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(14799..15308)
DNA (510bp) protein (170aa)
Menaquinol oxidoreductase complex, cytochrome b subunit n=2 Tax=Geobacter metallireducens RepID=Q39TS6_GEOMG
cytochrome b/b6 protein Tax=RBG_16_Zixibacteria_53_22_curated
pcmC; menaquinol oxidoreductase complex, cytochrome b subunit
13_1_40cm_3_scaffold_355_20
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15504..16013)
DNA (510bp) protein (170aa)
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1) Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1)
2Fe-2S iron sulfur protein id=4444196 bin=GWC2_Ignavibacteria_56_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_3_scaffold_355_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16010..17962)
DNA (1953bp) protein (651aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=1775304 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
4Fe-4S ferredoxin
13_1_40cm_3_scaffold_355_22

Not on your lists

comp(17989..18600)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZZ5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00504.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_355_23

Not on your lists

comp(18661..20133)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PZZ4_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI00503.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_355_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20323..21039)
DNA (717bp) protein (239aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK0_KORVE
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABF40500.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_3_scaffold_355_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21261..21974
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITH9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39821.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_3_scaffold_355_26
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22202..24604
DNA (2403bp) protein (801aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeoca
phosphoketolase (EC:4.1.2.9)
Phosphoketolase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF87_9CHRO
13_1_40cm_3_scaffold_355_27
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24608..25843
DNA (1236bp) protein (412aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillato
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FZJ5_9CYAN rbh
13_1_40cm_3_scaffold_355_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25856..26269)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EU85_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_1_40cm_3_scaffold_355_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26378..27262)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037418F0
hypothetical protein
UspA {ECO:0000313|EMBL:ABF41942.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_40cm_3_scaffold_355_30
unknown

Not on your lists

27442..27618
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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