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13_1_40cm_3_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_36_1
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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3..1361
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_3_scaffold_36_2
unknown

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1497..2312
DNA (816bp) protein (272aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_3
unknown

Not on your lists

2380..2829
DNA (450bp) protein (150aa)
hypothetical protein
13_1_40cm_3_scaffold_36_trna_1
unknown

Not on your lists

comp(2859..2965)
DNA (107bp)
transferRNA
13_1_40cm_3_scaffold_36_4
unknown

Not on your lists

comp(3018..3254)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3411..3836
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIT9_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_36_6
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(4215..5324)
DNA (1110bp) protein (370aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
O-succinylbenzoate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SF69_9BACT
menC; O-succinylbenzoate synthase
13_1_40cm_3_scaffold_36_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(5422..6483)
DNA (1062bp) protein (354aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00037F89B9
radical SAM protein Tax=CSP1_1_Thaumarchaeota
radical SAM protein
13_1_40cm_3_scaffold_36_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6658..7197
DNA (540bp) protein (180aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
13_1_40cm_3_scaffold_36_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7226..7657
DNA (432bp) protein (144aa)
putative histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
HIT family hydrolase, diadenosine tetraphosphate hydrolase id=3676535 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
histidine triad protein
13_1_40cm_3_scaffold_36_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(7654..8349)
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC36_METSL
endonuclease III Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_36_11
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8350..9195)
DNA (846bp) protein (282aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJR7_METFS
apurinic endonuclease APN1
13_1_40cm_3_scaffold_36_12
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9313..9774)
DNA (462bp) protein (154aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCR7_THET1
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ42582.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-
13_1_40cm_3_scaffold_36_13
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10297..11847
DNA (1551bp) protein (517aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EDE82 rbh
ABC transporter ATP-binding protein
Thermococcus eurythermalis strain A501, complete genome {ECO:0000313|EMBL:AIU69746.1}; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" sour
13_1_40cm_3_scaffold_36_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(12626..13087)
DNA (462bp) protein (154aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_36_15
unknown

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13203..13538
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(13979..14533)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IME5_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_36_17

Not on your lists

comp(14593..15996)
DNA (1404bp) protein (468aa)
Geranylgeranyl reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI47_9EURY
Geranylgeranyl reductase {ECO:0000313|EMBL:AIF08534.1}; TaxID=1456118 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_31_E07.;"
putative digeranylgeranylglycerophospholipid reductase
13_1_40cm_3_scaffold_36_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

16141..17112
DNA (972bp) protein (324aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
1,4-dihydroxy-2-naphthoateoctaprenyltransferase id=2823138 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
hypothetical protein
13_1_40cm_3_scaffold_36_19
unknown

Not on your lists

17090..17338
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_20
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17666..18835
DNA (1170bp) protein (390aa)
Efflux transport protein n=2 Tax=Pyrococcus furiosus RepID=I6UPM8_9EURY
efflux transport protein
Efflux transport protein {ECO:0000313|EMBL:AFN03776.1}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
13_1_40cm_3_scaffold_36_21
Hydrogenobaculum sp. HO, Hydrogenobaculum, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(18801..19217)
DNA (417bp) protein (139aa)
DNA ligase D, 3'-phosphoesterase domain protein n=4 Tax=Hydrogenobaculum RepID=M1RCZ9_9AQUI
DNA ligase D, 3'-phosphoesterase domain protein
DNA ligase D, 3'-phosphoesterase domain protein {ECO:0000313|EMBL:AGG14966.1}; TaxID=547144 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobaculum.;" source="Hydrogenobaculum sp. HO
13_1_40cm_3_scaffold_36_22
unknown

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comp(19243..19767)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19918..21129)
DNA (1212bp) protein (404aa)
Kef-type K transport system, membrane component n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RWP1_CENSY
sodium/hydrogen exchange Tax=RBG_16_Archaea_50_20_curated
membrane protein of unknown function
13_1_40cm_3_scaffold_36_24
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21780..22769
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IF41_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB16811.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
13_1_40cm_3_scaffold_36_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(22846..24672)
DNA (1827bp) protein (609aa)
DNA-binding response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_36_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(24863..25732)
DNA (870bp) protein (290aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription initiation factor TFIIB
13_1_40cm_3_scaffold_36_27
unknown

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25763..26353
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_3_scaffold_36_28
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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comp(26324..27493)
DNA (1170bp) protein (390aa)
solA; N-methyltryptophan oxidase; K00301 sarcosine oxidase [EC:1.5.3.1] Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
Glycine/D-amino acid oxidases (deaminating) (EC:1.5.3.1)
Peroxisomal sarcosine oxidase n=1 Tax=Oryctolagus cuniculus RepID=G1T932_RABIT
13_1_40cm_3_scaffold_36_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(27558..27791)
DNA (234bp) protein (78aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0ILF5_LEPFC
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
antibiotic biosynthesis monooxygenase
Displaying items 1-30 of 45 in total

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