ggKbase home page

13_1_40cm_3_scaffold_466

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_466_1
R_RIF_OD1_12_45_11c, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2..2704
DNA (2703bp) protein (901aa)
fibronectin I domain-containing protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_12_45_11c_curated
Serine protease, subtilase family id=3647641 bin=GWA2_Elusimicrobia_56_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
repeat-containing protein
13_1_40cm_3_scaffold_466_2
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

2701..4065
DNA (1365bp) protein (455aa)
Serine protease, subtilase family id=3647641 bin=GWA2_Elusimicrobia_56_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
peptidase S8/S53 subtilisin kexin sedolisin Tax=GWC2_Elusimicrobia_56_31_curated
fibronectin I domain-containing protein
13_1_40cm_3_scaffold_466_3
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(4052..5632)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371977B
Mo-co oxidoreductase dimerization domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
13_1_40cm_3_scaffold_466_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(5678..8812)
DNA (3135bp) protein (1045aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGW5_9BACT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBE68996.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_3_scaffold_466_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8895..9719)
DNA (825bp) protein (275aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDM66241.1}; EC=1.1.1.132 {ECO:0000313|EMBL:CDM66241.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003768DBD
UDP-glucose/GDP-mannose family dehydrogenase
13_1_40cm_3_scaffold_466_6

Not on your lists

comp(9664..10185)
DNA (522bp) protein (174aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
UDP-glucose 6-dehydrogenase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1APZ3_9ZZZZ
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EQD44110.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_3_scaffold_466_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10175..11386)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F32C9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_3_scaffold_466_8
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(11391..12956)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371977B
Mo-co oxidoreductase dimerization domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
13_1_40cm_3_scaffold_466_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12947..14812)
DNA (1866bp) protein (622aa)
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:CDM66249.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CDM66249.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CD2_SOLUE
13_1_40cm_3_scaffold_466_10
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(14858..15649)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00036DE0F1
type 11 methyltransferase
hypothetical protein Tax=RIFOXYB2_FULL_RIF07_49_35_curated
13_1_40cm_3_scaffold_466_11

Not on your lists

comp(15646..16770)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003689C87
family 2 glycosyl transferase
Putative Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBH98844.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_3_scaffold_466_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16767..18935)
DNA (2169bp) protein (723aa)
Heparinase II/III family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP2_SOLUE
heparinase II/III family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
heparinase II/III family protein
13_1_40cm_3_scaffold_466_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(18932..20515)
DNA (1584bp) protein (528aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDL1_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_3_scaffold_466_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20512..21483)
DNA (972bp) protein (324aa)
UDP-glucuronate decarboxylase (EC:4.1.1.35)
UDP-glucuronate decarboxylase (EC:4.1.1.35); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
UDP-glucuronate decarboxylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW9_RHOMR
13_1_40cm_3_scaffold_466_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(21480..22178)
DNA (699bp) protein (233aa)
UDP-glucose dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=24408302 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
nsd; nucleotide sugar dehydrogenase
13_1_40cm_3_scaffold_466_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22833..23945)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CA46F
Glycosyltransferase {ECO:0000313|EMBL:CDM66251.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyl transferase, group 1
13_1_40cm_3_scaffold_466_17
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23942..25012)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003452AB1
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_466_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25018..26100)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003757D0A
Hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
13_1_40cm_3_scaffold_466_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(26115..26594)
DNA (480bp) protein (160aa)
Putative Flavin reductase-like protein, contains FMN-binding domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGK5_9BACT
putative flavin reductase-like protein, contains FMN-binding domain
Putative Flavin reductase-like protein, contains FMN-binding domain {ECO:0000313|EMBL:CBK42392.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Can
13_1_40cm_3_scaffold_466_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26636..26971)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003609E30
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
13_1_40cm_3_scaffold_466_21
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26964..27308)
DNA (345bp) protein (115aa)
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX71_RUBXD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABG04007.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
13_1_40cm_3_scaffold_466_22
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27508..28734)
DNA (1227bp) protein (409aa)
Fatty acid oxidation complex subunit alpha protein {ECO:0000313|EMBL:ERJ19713.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ERJ19713.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sali
Fatty acid oxidation complex subunit alpha protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2G066_9GAMM
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_3_scaffold_466_23
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28731..29768)
DNA (1038bp) protein (346aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2R3_MAHA5
13_1_40cm_3_scaffold_466_24
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(29765..30310)
DNA (546bp) protein (182aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCD2_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCY46467.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
13_1_40cm_3_scaffold_466_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30291..31925)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F5B8D
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
AMP-dependent synthetase and ligase
13_1_40cm_3_scaffold_466_26
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(31922..32956)
DNA (1035bp) protein (345aa)
putative alkanesulfonate monooxygenase (EC:1.14.14.5)
Putative Alkanesulfonate monooxygenase {ECO:0000313|EMBL:CBK42399.1}; EC=1.14.14.5 {ECO:0000313|EMBL:CBK42399.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospir
Putative Alkanesulfonate monooxygenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGL2_9BACT
13_1_40cm_3_scaffold_466_27
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(32938..34212)
DNA (1275bp) protein (425aa)
glycosyl transferase group 1 protein (EC:2.4.1.-)
Glycosyl transferase, group 1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH20_9BACT
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_1_40cm_3_scaffold_466_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(34209..35528)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YPT9_9ALTE
wzy family polymerase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_40cm_3_scaffold_466_29
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(35703..36470)
DNA (768bp) protein (256aa)
Sugar transferase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3L8_THEGP
sugar transferase
Sugar transferase {ECO:0000313|EMBL:AEH22467.1}; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodes
13_1_40cm_3_scaffold_466_30
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(36475..37221)
DNA (747bp) protein (249aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q098D6_STIAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
Displaying items 1-30 of 50 in total

View Taxonomy