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13_1_40cm_3_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_438_1
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(2..478)
DNA (477bp) protein (159aa)
Blue (Type 1) copper domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN01_9CHLR
blue (type 1) copper domain-containing protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_438_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

687..980
DNA (294bp) protein (98aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_438_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

977..1678
DNA (702bp) protein (234aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RIFCSPLOWO2_12_F
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=HIS4_RUBXD
13_1_40cm_3_scaffold_438_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1675..2394
DNA (720bp) protein (240aa)
phosphatase family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphatase family protein id=14628177 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
metallophosphoesterase
13_1_40cm_3_scaffold_438_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2444..2866
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CVC9_DEIDV
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_438_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3023..4885
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDE9_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_438_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4882..6921
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDE9_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_438_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6934..7362
DNA (429bp) protein (143aa)
UspA domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FP82_DEHSB
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UspA domain-containing protein
13_1_40cm_3_scaffold_438_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7359..7862
DNA (504bp) protein (168aa)
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
TrkA-N domain-containing protein
TrkA-N domain protein id=2845470 bin=GWC2_OP3_44_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
13_1_40cm_3_scaffold_438_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7863..8519
DNA (657bp) protein (219aa)
K+ transport systems, NAD-binding component Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
potassium channel-like protein; K03499 trk system potassium uptake protein TrkA id=14628181 bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
TrkA-N domain-containing protein
13_1_40cm_3_scaffold_438_11
unknown

Not on your lists

8558..9556
DNA (999bp) protein (333aa)

This feature has no annotations

13_1_40cm_3_scaffold_438_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9553..9783)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_438_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10084..10806)
DNA (723bp) protein (241aa)
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ELZ2_9CHLR
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) {ECO:0000313|EMBL:CCF85705.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaer
transcriptional regulator
13_1_40cm_3_scaffold_438_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(10803..12314)
DNA (1512bp) protein (504aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / Y
Histidine kinase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGX7_THET1 rbh
13_1_40cm_3_scaffold_438_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12331..12525)
DNA (195bp) protein (65aa)
heat shock protein 70; K04046 hypothetical chaperone protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_438_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13869..14240
DNA (372bp) protein (124aa)
czcD; cation-efflux system membrane protein; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative transcriptional regulator, MerR family id=4015580 bin=GWC2_Chloroflexi_73_18 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
MerR family transcriptional regulator
13_1_40cm_3_scaffold_438_17

Not on your lists

14256..14762
DNA (507bp) protein (169aa)
Marine sediment metagenome DNA, contig: S01H1_S16902 {ECO:0000313|EMBL:GAG20831.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Putative small heat shock protein id=2241872 bin=GWB2_Chloroflexi_49_20 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
molecular chaperone
13_1_40cm_3_scaffold_438_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

14759..17191
DNA (2433bp) protein (811aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_RIF_CHLX_69_14_curated
Lon protease id=4015581 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Lon; ATP-dependent Lon protease
13_1_40cm_3_scaffold_438_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17205..18197
DNA (993bp) protein (331aa)
Chaperone protein DnaJ n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYV9_THERP
chaperone DnaJ domain-containing protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
chaperone protein dnaJ
13_1_40cm_3_scaffold_438_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

18194..20857
DNA (2664bp) protein (888aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
clpB; chaperone id=14430166 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ATP-dependent chaperone ClpB
13_1_40cm_3_scaffold_438_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20861..21919
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B7274F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_438_22
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21947..23173)
DNA (1227bp) protein (409aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Saccharopolyspora erythraea RepID=A4FG37_SACEN
CoA transferase {ECO:0000313|EMBL:EQD85485.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
13_1_40cm_3_scaffold_438_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23158..23961)
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Q7_SPHTD rbh
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACZ39224.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_3_scaffold_438_24
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24021..25061
DNA (1041bp) protein (347aa)
hypothetical protein; K07795 putative tricarboxylic transport membrane protein Tax=CG_Syntroph_01
Putative uncharacterized protein id=4934490 bin=GWC2_Syntrophus__56_31 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_438_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

25062..25481
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=4827672 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_3_scaffold_438_26
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25482..27002
DNA (1521bp) protein (507aa)
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=CG_Syntroph_01
Tricarboxylate transport membrane protein id=3932087 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transporter
13_1_40cm_3_scaffold_438_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

27092..28231
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B7274F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_438_28
unknown

Not on your lists

comp(28194..28469)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_3_scaffold_438_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(28494..29027)
DNA (534bp) protein (178aa)
Methyltransferase type 12 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9E2_SPHTD
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ACZ40435.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sou
13_1_40cm_3_scaffold_438_30
unknown

Not on your lists

29237..29641
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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