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13_1_40cm_3_scaffold_4609

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4609_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..3065)
DNA (3063bp) protein (1021aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14430231 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_4609_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3105..6476)
DNA (3372bp) protein (1124aa)
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
sti:Sthe_1974 selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor id=1242927 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
selB; selenocysteine-specific translation elongation factor
13_1_40cm_3_scaffold_4609_3
unknown

Not on your lists

comp(6473..6625)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6604..6987)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP id=4133171 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
putative endoribonuclease L-PSP; K07567 TdcF protein Tax=GWC2_Geobacteraceae_55_20_curated
putative endoribonuclease L-PSP
13_1_40cm_3_scaffold_4609_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6984..8030)
DNA (1047bp) protein (349aa)
selA; L-seryl-tRNA(Sec) selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Chloroflexus RepID=A9WIF3_CHLAA
13_1_40cm_3_scaffold_4609_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8317..8787)
DNA (471bp) protein (157aa)
putative lipid kinase yegS-like protein (EC:2.7.1.-); K07029 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
diacylglycerol kinase; K07029 id=24419259 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
diacylglycerol kinase
13_1_40cm_3_scaffold_4609_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9181..9675)
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein id=3810769 bin=GWC2_Chloroflexi_73_18 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_4609_8
unknown

Not on your lists

9714..10019
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

10051..10506
DNA (456bp) protein (152aa)
Transport-associated n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C893_SPHTD
transport-associated
Transport-associated {ECO:0000313|EMBL:ACZ40036.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="
13_1_40cm_3_scaffold_4609_trna_1
unknown

Not on your lists

10520..10593
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_4609_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10716..11201)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA9_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40752.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_3_scaffold_4609_11
unknown

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comp(11198..11428)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11482..11871)
DNA (390bp) protein (130aa)
LuxR family transcriptional regulator Tax=RBG_16_Armatimonadetes_67_12_curated
LuxR family two component transcriptional regulator id=24444266 bin=RBG_19FT_COMBO_GAL15_69_19 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
response regulator receiver
13_1_40cm_3_scaffold_4609_13
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11855..12172)
DNA (318bp) protein (106aa)
LuxR family transcriptional regulator n=2 Tax=Labrenzia RepID=U7FME8_9RHOB
LuxR family transcriptional regulator {ECO:0000313|EMBL:ERP86068.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labre
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_4609_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12265..14007)
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBQ3_CELFN rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_4609_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14004..15371)
DNA (1368bp) protein (456aa)
Putative Magnesium transporter MgtE n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVZ3_9BACT
Mg2+/Co2+ transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mg2+/Co2+ transporter
13_1_40cm_3_scaffold_4609_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15591..15830)
DNA (240bp) protein (80aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_3_scaffold_4609_17
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

Not on your lists

comp(15827..16114)
DNA (288bp) protein (96aa)
Resistance protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C0V1_CYCSP
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Peregrinibacteria_48_14_curated
yGGT; resistance protein
13_1_40cm_3_scaffold_4609_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16115..16678)
DNA (564bp) protein (188aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RBG_16_Actinobacteria_68_12_curated
Deoxycytidine triphosphate deaminase n=2 Tax=Rhodococcus RepID=H0JSM9_9NOCA
deoxycytidine triphosphate deaminase
13_1_40cm_3_scaffold_4609_19
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16659..17417)
DNA (759bp) protein (253aa)
HAD family hydrolase (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IWM4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33195.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
13_1_40cm_3_scaffold_4609_20
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(17392..17943)
DNA (552bp) protein (184aa)
nrdR; ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR Tax=CSP1_4_Chloroflexi
nrdR; ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR id=14628881 bin=bin8_Chloro species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
nrdR; transcriptional regulator NrdR
13_1_40cm_3_scaffold_4609_21
unknown

Not on your lists

comp(17924..18109)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_22
unknown

Not on your lists

18319..18453
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_23
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18387..19004)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KG36_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03089.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
13_1_40cm_3_scaffold_4609_24
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(19118..20242)
DNA (1125bp) protein (375aa)
FtsZ; cell division protein FtsZ; K03531 cell division protein FtsZ id=14629186 bin=bin8_Chloro species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi rbh
FtsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CSP1_4_Chloroflexi
cell division protein FtsZ
13_1_40cm_3_scaffold_4609_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(20592..21266)
DNA (675bp) protein (225aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cell division protein FtsA; K03590 cell division protein FtsA id=14629185 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
cell division protein FtsA
13_1_40cm_3_scaffold_4609_26
unknown

Not on your lists

21289..21855
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_3_scaffold_4609_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21780..22103)
DNA (324bp) protein (108aa)
small basic protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Small basic protein id=4665449 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_4609_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22104..22892)
DNA (789bp) protein (263aa)
Cell division protein FtsQ n=2 Tax=Chloroflexus RepID=FTSQ_CHLAA
FtsQ-type polypeptide-transport-associated domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 29 items

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