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13_1_40cm_3_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_506_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_40cm_3_scaffold_506_trna_1
unknown

Not on your lists

comp(167..250)
DNA (84bp)
transferRNA
13_1_40cm_3_scaffold_506_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(399..2198)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000377132B
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein kinase
13_1_40cm_3_scaffold_506_3
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2333..2572)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003640B9B
Uncharacterized protein {ECO:0000313|EMBL:KFI07568.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
13_1_40cm_3_scaffold_506_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2703..3140)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003640B9B
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:KFC68355.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae;
amidohydrolase
13_1_40cm_3_scaffold_506_5
unknown

Not on your lists

comp(3386..3664)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_3_scaffold_506_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3820..5211)
DNA (1392bp) protein (464aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_506_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5157..6137)
DNA (981bp) protein (327aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_506_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6150..8360)
DNA (2211bp) protein (737aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_506_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8366..9931)
DNA (1566bp) protein (522aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_1_40cm_3_scaffold_506_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9928..11010)
DNA (1083bp) protein (361aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase family protein
13_1_40cm_3_scaffold_506_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11007..11912)
DNA (906bp) protein (302aa)
Putative M42 glutamyl aminopeptidase n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1C3_9ZZZZ
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_1_40cm_3_scaffold_506_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11909..12595)
DNA (687bp) protein (229aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
phosphoribosylglycinamide formyltransferase
13_1_40cm_3_scaffold_506_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12592..13098)
DNA (507bp) protein (169aa)
Bacterial pre-peptidase C-terminal domain family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VRP8_9CYAN
peptidase C14 caspase catalytic subunit P20 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_40cm_3_scaffold_506_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13121..13690)
DNA (570bp) protein (190aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bact
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I7_HERA2
histidinol-phosphate phosphatase family protein
13_1_40cm_3_scaffold_506_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13683..15038)
DNA (1356bp) protein (452aa)
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L70_SYMTH
13_1_40cm_3_scaffold_506_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15035..16384)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_506_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(16494..19037)
DNA (2544bp) protein (848aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
13_1_40cm_3_scaffold_506_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19186..21264
DNA (2079bp) protein (693aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
13_1_40cm_3_scaffold_506_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21346..22536
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
13_1_40cm_3_scaffold_506_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22536..23099
DNA (564bp) protein (188aa)
BioY protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NR36_MARHT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
BioY protein
13_1_40cm_3_scaffold_506_21
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23096..23959
DNA (864bp) protein (288aa)
Abortive infection protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6K5_TERSS
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADV82744.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
13_1_40cm_3_scaffold_506_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23956..24804
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG94_RHOM4
3-hydroxybutyryl-CoA dehydrogenase
13_1_40cm_3_scaffold_506_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24788..25957
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_506_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25896..27056
DNA (1161bp) protein (387aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_3_scaffold_506_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27049..27489
DNA (441bp) protein (147aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Ribose 5-phosphate isomerase B n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHB0_KOSOT
13_1_40cm_3_scaffold_506_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27482..28762
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine hydroxymethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X7_GEMAT rbh
Serine hydroxymethyltransferase
13_1_40cm_3_scaffold_506_27
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

28755..29234
DNA (480bp) protein (160aa)
Putative heat shock protein, Hsp20 family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L020_THERP
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RifOxyB12_full_Planctomycetes_42_10_curated
putative heat shock protein, Hsp20 family
13_1_40cm_3_scaffold_506_28
bacterium UASB270, Bacteria

Not on your lists

29235..31640
DNA (2406bp) protein (802aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=14428721 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
ATP-dependent protease La (EC:3.4.21.53)
13_1_40cm_3_scaffold_506_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31637..32023
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
Displaying items 1-30 of 34 in total

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