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13_1_40cm_3_scaffold_580

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_580_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..2888)
DNA (2886bp) protein (962aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DEAD/H associated domain protein id=4895050 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_580_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2908..3774)
DNA (867bp) protein (289aa)
arylformamidase (EC:3.5.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
arylformamidase (EC:3.5.1.9)
Esterase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GVT6_9BURK
13_1_40cm_3_scaffold_580_3
unknown

Not on your lists

comp(3840..4433)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_3_scaffold_580_4
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(4430..4993)
DNA (564bp) protein (188aa)
hypothetical protein Tax=RBG_13_Spirochaetes_68_11_curated
hypothetical protein id=14425339 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_3_scaffold_580_5
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5043..6572)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HWG2_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
13_1_40cm_3_scaffold_580_6
unknown

Not on your lists

comp(6686..7012)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_3_scaffold_580_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7093..9348
DNA (2256bp) protein (752aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oxidoreductase (EC:1.-.-.-)
Oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAA3_9PROT rbh
13_1_40cm_3_scaffold_580_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9443..10594
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C3DD7
Uncharacterized protein {ECO:0000313|EMBL:ETW98502.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mandelate racemase/muconate lactonizing protein
13_1_40cm_3_scaffold_580_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..11258
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KJ01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW96303.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ThiJ/PfpI family protein
13_1_40cm_3_scaffold_580_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11291..12256)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037147D2
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
13_1_40cm_3_scaffold_580_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12253..13248)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000363CB9B
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Iron-sulfur cluster-binding protein
13_1_40cm_3_scaffold_580_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..13888
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04735.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_3_scaffold_580_13
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13902..14072)
DNA (171bp) protein (57aa)
ABC transporter n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8DLZ1_9BACI
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
inner-membrane translocator
13_1_40cm_3_scaffold_580_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14082..14813)
DNA (732bp) protein (244aa)
ABC transporter related n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIP4_ANADF
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABS28590.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_3_scaffold_580_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14800..15567)
DNA (768bp) protein (256aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI8_METS4
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACA16728.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_3_scaffold_580_16

Not on your lists

comp(15542..16393)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL25824.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=3566005 bin=GWC2_ACD39_50_8 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
branched-chain amino acid abc transporter permease protein
13_1_40cm_3_scaffold_580_17
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16401..17270)
DNA (870bp) protein (290aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IVZ8_DESMD
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AFQ45915.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfospo
13_1_40cm_3_scaffold_580_18
unknown

Not on your lists

17333..17476
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_3_scaffold_580_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17491..18669
DNA (1179bp) protein (393aa)
Branched-chain amino acid abc transporter, amino acid-binding protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TAN0_HELMI
branched-chain amino acid abc transporter amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
branched-chain amino acid abc transporter amino acid-binding protein
13_1_40cm_3_scaffold_580_20
unknown

Not on your lists

18676..18780
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_3_scaffold_580_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18777..20153
DNA (1377bp) protein (459aa)
coenzyme A ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
coenzyme A ligase (EC:6.2.1.30)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI00036C5B0F
13_1_40cm_3_scaffold_580_22
unknown

Not on your lists

20150..20332
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_580_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20329..21657
DNA (1329bp) protein (443aa)
peptidase M20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase M20 family protein id=4911971 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M20
13_1_40cm_3_scaffold_580_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21771..22304
DNA (534bp) protein (178aa)
Putative uncharacterized protein id=4646422 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_3_scaffold_580_25
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22336..23061
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037D4C08
nucleoside phosphorylase
Nucleoside phosphorylase {ECO:0000313|EMBL:AFY97024.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
13_1_40cm_3_scaffold_580_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

23058..23441
DNA (384bp) protein (128aa)
hypothetical protein id=1247387 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_3_scaffold_580_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23470..24018
DNA (549bp) protein (183aa)
Putative acetyltransferase protein id=2497913 bin=GWC2_Methylomirabilis_70_24 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acetyltransferase GCN5 Tax=GWA2_Rokubacteria_70_23_curated
GCN5 family N-acetyltransferase
13_1_40cm_3_scaffold_580_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23915..25438)
DNA (1524bp) protein (508aa)
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
NADH:flavin oxidoreductase/NADH oxidase id=4048083 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
NADH:flavin oxidoreductase
13_1_40cm_3_scaffold_580_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25894..26661)
DNA (768bp) protein (256aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-[acyl-carrier-protein] reductase Tax=GWA2_Rokubacteria_73_35_curated
short-chain dehydrogenase
13_1_40cm_3_scaffold_580_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26895..28163
DNA (1269bp) protein (423aa)
acetyl-CoA hydrolase (EC:2.8.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-CoA hydrolase/transferase id=4895019 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA hydrolase/transferase
Displaying items 1-30 of 37 in total

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