name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_3_scaffold_6_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1..1158)
|
metallo-beta-lactamase superfamily hydrolase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rnjA; ribonuclease J 1 (RNase J1) (EC:3.1.-.-)
Ribonuclease J 1 (RNase J1) id=2399877 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1361..2611)
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putative peptidase M23 family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23B id=2399879 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative peptidase M23 family protein
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13_1_40cm_3_scaffold_6_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(2751..3533)
|
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWA2_Rokubacteria_73_35_curated
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A id=2399881 bin=GWA2_Methylomirabilis_73_35 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3572..4165)
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dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWA2_Rokubacteria_73_35_curated
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase id=2399883 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(4162..6720)
|
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase id=2399886 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
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13_1_40cm_3_scaffold_6_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(6717..9707)
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glutamate-ammonia ligase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamate-ammonia-ligase adenylyltransferase id=3240703 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glnE; glutamate--ammonia ligase adenylyltransferase
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13_1_40cm_3_scaffold_6_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(9914..10252)
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Nitrogen regulatory protein P-II id=4756404 bin=GWA2_Methylomirabilis_73_35 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glnB; nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=GWA2_Rokubacteria_73_35_curated
glnB; nitrogen regulatory protein P-II
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13_1_40cm_3_scaffold_6_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(10254..11861)
|
Na/Pi-cotransporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Na/Pi-cotransporter II-related protein id=4082207 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Na/Pi-cotransporter II-like protein
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13_1_40cm_3_scaffold_6_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(11858..12538)
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phosphoglycerate mutase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fructose-2,6-bisphosphatase id=4756401 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
GpmB; fructose-2,6-bisphosphatase
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13_1_40cm_3_scaffold_6_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(12535..13947)
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glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase id=4756400 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
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13_1_40cm_3_scaffold_6_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(13949..15025)
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Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEF1_THEPS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
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13_1_40cm_3_scaffold_6_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(15039..15923)
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4-hydroxybenzoate polyprenyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative conserved membrane protein id=4756383 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-hydroxybenzoate polyprenyltransferase
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13_1_40cm_3_scaffold_6_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
comp(16031..17341)
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UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
nucleotide sugar dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Nucleotide-sugar dehydrogenase id=4811707 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
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13_1_40cm_3_scaffold_6_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17338..17727)
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glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamine--scyllo-inositol transaminase id=4082184 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17724..19940)
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organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Organic solvent tolerance protein id=4811709 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
organic solvent tolerance protein
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13_1_40cm_3_scaffold_6_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(19961..21277)
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folyl-polyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
folylpolyglutamate synthase (folylpoly-gamma-glutamatesynthetase) (EC:6.3.2.17)
FolC bifunctional protein id=4811710 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
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13_1_40cm_3_scaffold_6_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(21285..22145)
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accD; acetyl-CoA carboxylase carboxyltransferase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=3240638 bin=GWC2_Methylomirabilis_70_16 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA carboxyl transferase
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13_1_40cm_3_scaffold_6_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(22152..23147)
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tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWA2_Rokubacteria_73_35_curated
Tryptophan synthase alpha chain id=4059711 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
trpA; tryptophan synthase subunit alpha
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13_1_40cm_3_scaffold_6_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(23147..24346)
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trpB; tryptophan synthase subunit beta (EC:4.2.1.20) Tax=GWA2_Rokubacteria_73_35_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=4059712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
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Not on your lists |
comp(24343..25029)
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N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=14627082 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=CSP1_6_Rokubacteria
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
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13_1_40cm_3_scaffold_6_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(25220..26020)
|
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=4059714 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_3_scaffold_6_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(26031..27236)
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Quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nicotinate phosphoribosyltransferase id=4082176 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nicotinate phosphoribosyltransferase
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13_1_40cm_3_scaffold_6_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(27515..28381)
|
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=14625246 bin=bin7_NC10_sister species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin7_NC10_sister organism_group=NC10
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
|
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13_1_40cm_3_scaffold_6_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(28479..29609)
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glycosyl transferase family protein; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase id=4059719 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
|
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13_1_40cm_3_scaffold_6_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(29660..30640)
|
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-) Tax=GWA2_Rokubacteria_73_35_curated
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase id=4059720 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_40cm_3_scaffold_6_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(30774..31388)
|
LmbE family protein id=4059721 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
LmbE family protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
|
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13_1_40cm_3_scaffold_6_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(31389..32111)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4059722 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
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13_1_40cm_3_scaffold_6_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(32149..33606)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4546759 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbh
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13_1_40cm_3_scaffold_6_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(33603..34763)
|
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4546758 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
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13_1_40cm_3_scaffold_6_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(34760..36880)
|
hepB; glycosyl transferase (EC:2.4.1.57)
glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Predicted glycosyl transferase, group 1 id=4546757 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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