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13_1_40cm_3_scaffold_592

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_592_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..507
DNA (507bp) protein (169aa)
Anti-sigma-factor antagonist id=4337253 bin=GWC2_Ignavibacteria_56_12 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anti-sigma-factor antagonist
13_1_40cm_3_scaffold_592_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

540..932
DNA (393bp) protein (131aa)
Antagonist protein RsbS id=4337252 bin=GWC2_Ignavibacteria_56_12 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rsbS; sigma activity regulator
13_1_40cm_3_scaffold_592_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

925..1335
DNA (411bp) protein (137aa)
anti-sigma regulatory factor, serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Putative anti-sigma regulatory factor, serine/threonine protein kinase id=4927123 bin=GWA2_Ignavibacteria_55_11 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_40cm_3_scaffold_592_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1328..1963
DNA (636bp) protein (212aa)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:KCZ71459.1}; EC=3.1.3.3 {ECO:0000313|EMBL:KCZ71459.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Can
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase
13_1_40cm_3_scaffold_592_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2029..3378
DNA (1350bp) protein (450aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2304889 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
two component, sigma54 specific, transcriptional regulator, Fis family
13_1_40cm_3_scaffold_592_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3375..4676
DNA (1302bp) protein (434aa)
NB-ARC domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3D1_THECD
hypothetical protein
NB-ARC domain protein {ECO:0000313|EMBL:ACY96056.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strai
13_1_40cm_3_scaffold_592_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4686..4931)
DNA (246bp) protein (82aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_592_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4971..6365)
DNA (1395bp) protein (465aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=16960850 bin=RBG_16_Aminicenantes_66_30 species=Eudoraea adriatica genus=Eudoraea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_592_9
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6487..7455
DNA (969bp) protein (323aa)
Quinone oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1B8_9RHOB
Quinone oxidoreductase {ECO:0000313|EMBL:EAQ02101.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis
NAD(P)H quinone oxidoreductase
13_1_40cm_3_scaffold_592_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7707..8156
DNA (450bp) protein (150aa)
General secretion pathway protein H id=4678846 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_592_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8153..8542
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_592_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8539..9381
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_592_13

Not on your lists

9402..10478
DNA (1077bp) protein (359aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN34531.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_3_scaffold_592_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10486..13692)
DNA (3207bp) protein (1069aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=24445683 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein
13_1_40cm_3_scaffold_592_15
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13837..14967
DNA (1131bp) protein (377aa)
Surface antigen n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A7W5_COLFT
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59969.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
13_1_40cm_3_scaffold_592_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15045..15818
DNA (774bp) protein (258aa)
hypothetical protein; K00540 [EC:1.-.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FVI7_9CYAN
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_592_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15822..17396)
DNA (1575bp) protein (525aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
protein kinase
13_1_40cm_3_scaffold_592_18
unknown

Not on your lists

17514..18044
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_3_scaffold_592_19
unknown

Not on your lists

18065..18469
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_3_scaffold_592_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18571..19557)
DNA (987bp) protein (329aa)
putative oxidoreductase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RBG_16_Acidobacteria_70_10_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A858_GEMAT id=5224739 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
putative oxidoreductase
13_1_40cm_3_scaffold_592_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19554..20042)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A859_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_592_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20140..21126
DNA (987bp) protein (329aa)
Aldo/keto reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IE00_ANADE
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:CDM64158.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
aldo/keto reductase
13_1_40cm_3_scaffold_592_23
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(21123..23090)
DNA (1968bp) protein (656aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJF4_9CYAN
tolB; peptidase S9 prolyl oligopeptidase active site domain protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY59046.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloe
13_1_40cm_3_scaffold_592_24
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

23216..24577
DNA (1362bp) protein (454aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4917884 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
class III aminotransferase Tax=GWC2_Elusimicrobia_65_9_curated
class III aminotransferase
13_1_40cm_3_scaffold_592_25
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

24649..25974
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
4-aminobutyrate aminotransferase
13_1_40cm_3_scaffold_592_26
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

26029..26862
DNA (834bp) protein (278aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RBG_16_Elusimicrobia_66_12_curated
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_40cm_3_scaffold_592_27
unknown

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comp(27178..27336)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_3_scaffold_592_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

27591..29342
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_40cm_3_scaffold_592_29
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29321..31840
DNA (2520bp) protein (840aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_3_scaffold_592_30
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

31935..33887
DNA (1953bp) protein (651aa)
Peptidase S9, prolyl oligopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQB9_KORVE
peptidase S9 prolyl oligopeptidase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
peptidase S9, prolyl oligopeptidase
Displaying items 1-30 of 38 in total

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