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13_1_40cm_3_scaffold_672

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_672_1
unknown

Not on your lists

3..392
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_3_scaffold_672_2
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(402..1385)
DNA (984bp) protein (328aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EXB5_9DELT
electron transfer flavoprotein alpha-subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
electron transfer flavoprotein subunit alpha/beta
13_1_40cm_3_scaffold_672_3
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(1389..2120)
DNA (732bp) protein (244aa)
electron transfer flavoprotein subunit beta Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit id=24469727 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
electron transfer flavoprotein subunit beta
13_1_40cm_3_scaffold_672_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2266..2553
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036C16EB
twin arginine-targeting protein translocase; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatA
13_1_40cm_3_scaffold_672_5
RBG_16_Archaea_50_20_curated, Archaea

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2811..3560
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037A23C5
Sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatC
13_1_40cm_3_scaffold_672_6
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4321..4623
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EKQ51856.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
13_1_40cm_3_scaffold_672_7
unknown

Not on your lists

4867..5178
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_3_scaffold_672_8
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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5182..6612
DNA (1431bp) protein (477aa)
hypothetical protein id=17418201 bin=RBG_16_Aminicenantes_66_30 species=Kribbella catacumbae genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_16_Aminicenantes_66_30_curated
hypothetical protein
13_1_40cm_3_scaffold_672_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6829..7881
DNA (1053bp) protein (351aa)
purA; adenylosuccinate synthase (EC:6.3.4.4) Tax=RBG_13_Bathyarchaeota_38_9_curated
purA; adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATU0_9ARCH
13_1_40cm_3_scaffold_672_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(7822..8562)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000381BC1C
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_672_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(8633..9310)
DNA (678bp) protein (226aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=112989
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
hypothetical protein
13_1_40cm_3_scaffold_672_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9307..10245)
DNA (939bp) protein (313aa)
LPPG:FO 2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USE2_ROSS1
LPPG:FO 2-phospho-L-lactate transferase
13_1_40cm_3_scaffold_672_13
unknown

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comp(10296..10691)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_3_scaffold_672_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(10708..12534)
DNA (1827bp) protein (609aa)
GlmS; glucosamine 6-phosphate synthetase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Archaea_50_20_curated
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036C48FC
13_1_40cm_3_scaffold_672_15
unknown

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13287..13814
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_3_scaffold_672_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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14192..15232
DNA (1041bp) protein (347aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYU4_METFV
13_1_40cm_3_scaffold_672_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15234..16283
DNA (1050bp) protein (350aa)
Asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RBG_16_Archaea_50_20_curated
Asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVK0_METKA
13_1_40cm_3_scaffold_672_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16318..17106
DNA (789bp) protein (263aa)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_13_Bathyarchaeota_38_9_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NHZ5_METST
13_1_40cm_3_scaffold_672_19
RBG_16_Archaea_50_20_curated, Archaea

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17069..18127
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase; K11646 dehydroquinate synthase II [EC:1.4.1.-] Tax=RBG_16_Archaea_50_20_curated
aroB; 3-dehydroquinate synthase (EC:1.4.1.-)
3-dehydroquinate synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAN9_METCZ
13_1_40cm_3_scaffold_672_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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18124..18807
DNA (684bp) protein (228aa)
aroD; 3-dehydroquinate dehydratase, type I; K03785 3-dehydroquinate dehydratase I [EC:4.2.1.10] Tax=RBG_13_Bathyarchaeota_38_9_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3N1_DEHLB
13_1_40cm_3_scaffold_672_21
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

18814..19653
DNA (840bp) protein (280aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RBG_16_Chloroflexi_58_8_curated
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWT7_METFV
13_1_40cm_3_scaffold_672_22
RBG_16_Archaea_50_20_curated, Archaea

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19644..20522
DNA (879bp) protein (293aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RBG_16_Archaea_50_20_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6H8_9ARCH
13_1_40cm_3_scaffold_672_23
RBG_16_Archaea_50_20_curated, Archaea

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20705..21793
DNA (1089bp) protein (363aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RBG_16_Archaea_50_20_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=AROA_UNCMA
13_1_40cm_3_scaffold_672_24
RBG_16_Archaea_50_20_curated, Archaea

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21783..22883
DNA (1101bp) protein (367aa)
aroC; chorismate synthase (EC:4.2.3.5) Tax=RBG_16_Archaea_50_20_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N894_9ARCH
13_1_40cm_3_scaffold_672_25
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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22890..23975
DNA (1086bp) protein (362aa)
Chorismate mutase n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AAX2_IGNH4
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ABU82074.1}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospitalis (strain
13_1_40cm_3_scaffold_672_26
RBG_16_Archaea_50_20_curated, Archaea

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24151..25419
DNA (1269bp) protein (423aa)
trpE; anthranilate synthase component 1 (EC:4.1.3.27) Tax=RBG_16_Archaea_50_20_curated
trpE; anthranilate synthase component 1 (EC:4.1.3.27)
Anthranilate synthase component 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBR4_NITGG
13_1_40cm_3_scaffold_672_27
RBG_16_Archaea_50_20_curated, Archaea

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25416..25994
DNA (579bp) protein (193aa)
trpG; anthranilate synthase component II (EC:4.1.3.27) Tax=RBG_16_Archaea_50_20_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN19_NITGG
13_1_40cm_3_scaffold_672_28
RBG_16_Archaea_50_20_curated, Archaea

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26000..27049
DNA (1050bp) protein (350aa)
trpGD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:4.1.3.27); K13497 anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] Tax=RBG_16_Archaea_50
Anthranilate phosphoribosyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TRPD_SYMTH
anthranilate phosphoribosyltransferase
13_1_40cm_3_scaffold_672_29
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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27055..27831
DNA (777bp) protein (259aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=14428293 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:AIC14747.1}; EC=4.1.1.48 {ECO:0000313|EMBL:AIC14747.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitro
13_1_40cm_3_scaffold_672_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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27828..28868
DNA (1041bp) protein (347aa)
trpB; tryptophan synthase subunit beta (EC:4.1.2.20) Tax=RBG_13_Bathyarchaeota_38_9_curated
trpB; tryptophan synthase subunit beta (EC:4.1.2.20)
Tryptophan synthase beta chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBB0_NITGG
Displaying items 1-30 of 45 in total

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