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13_1_40cm_3_scaffold_674

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_674_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..777
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373C3C0
hypothetical protein; K09729 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_674_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(774..1340)
DNA (567bp) protein (189aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_674_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1306..1893)
DNA (588bp) protein (196aa)
Membrane protein-like protein n=2 Tax=Bacillus coagulans RepID=F7Z0F7_BACC6
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_674_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1919..2806)
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_1_40cm_3_scaffold_674_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2860..3678)
DNA (819bp) protein (273aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_674_6
unknown

Not on your lists

comp(3681..3857)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_3_scaffold_674_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4493..5698)
DNA (1206bp) protein (402aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKM0_ANASK
13_1_40cm_3_scaffold_674_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5784..6815)
DNA (1032bp) protein (344aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative 3-isopropylmalate dehydrogenase n=2 Tax=Myxococcus xanthus RepID=Q1DCT3_MYXXD
3-isopropylmalate dehydrogenase
13_1_40cm_3_scaffold_674_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6812..7474)
DNA (663bp) protein (221aa)
Double zinc ribbon
Double zinc ribbon Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_674_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7499..8548)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00036909A4
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG89356.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_674_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8628..9131)
DNA (504bp) protein (168aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
CMP/dCMP deaminase
13_1_40cm_3_scaffold_674_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9118..9705)
DNA (588bp) protein (196aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribonuclease HI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K0_GEMAT
ribonuclease H
13_1_40cm_3_scaffold_674_13
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9705..10469)
DNA (765bp) protein (255aa)
Universal stress protein family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF01_9BACT
Universal stress protein UspA {ECO:0000313|EMBL:KGJ21662.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus s
usp; universal stress protein family protein
13_1_40cm_3_scaffold_674_14
unknown

Not on your lists

comp(10477..10713)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_3_scaffold_674_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10739..11695)
DNA (957bp) protein (319aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
selD; Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) (EC:2.7.9.3) id=14431457 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
segregation protein A
13_1_40cm_3_scaffold_674_16
unknown

Not on your lists

comp(11832..12209)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_3_scaffold_674_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12206..13756)
DNA (1551bp) protein (517aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
N-acyl-D-aspartate/D-glutamate deacylase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
13_1_40cm_3_scaffold_674_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(13853..15256)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000363F794
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
amidohydrolase
13_1_40cm_3_scaffold_674_19
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15253..15741)
DNA (489bp) protein (163aa)
L-asparaginase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F64
Uncharacterized protein {ECO:0000313|EMBL:KFZ35960.1}; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10
hypothetical protein
13_1_40cm_3_scaffold_674_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15796..16068)
DNA (273bp) protein (91aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_674_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16142..18760
DNA (2619bp) protein (873aa)
amylo-alpha-16-glucosidase Tax=GWC2_Gemmatimonadetes_71_10_curated
amylo-alpha-16-glucosidase
hypothetical protein id=8266088 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_3_scaffold_674_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18809..21097
DNA (2289bp) protein (763aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
WD40 domain-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ig domain protein group 2 domain protein
13_1_40cm_3_scaffold_674_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21138..22190
DNA (1053bp) protein (351aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alcohol dehydrogenase zinc-binding domain protein
alcohol dehydrogenase zinc-binding domain protein id=14624585 bin=bin5_DeltaP species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_674_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


22349..24889
DNA (2541bp) protein (847aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
DNA gyrase subunit A
13_1_40cm_3_scaffold_674_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24891..25832
DNA (942bp) protein (314aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003750BEF
ilvA; threonine dehydratase
13_1_40cm_3_scaffold_674_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25829..27268
DNA (1440bp) protein (480aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
13_1_40cm_3_scaffold_674_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27265..28326
DNA (1062bp) protein (354aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW5_SORC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_674_28
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28386..29729
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036151AA
Amidohydrolase family 1 protein {ECO:0000313|EMBL:ELX13623.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jant
amidohydrolase
13_1_40cm_3_scaffold_674_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

29832..30926
DNA (1095bp) protein (365aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
13_1_40cm_3_scaffold_674_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31007..32119
DNA (1113bp) protein (371aa)
L-sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-sorbosone dehydrogenase id=4768386 bin=GWC2_Methylomirabilis_70_24 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
L-sorbosone dehydrogenase
Displaying items 1-30 of 41 in total

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