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13_1_40cm_3_scaffold_682

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_682_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(368..1498)
DNA (1131bp) protein (377aa)
diguanylate cyclase; K13590 diguanylate cyclase id=12555499 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
diguanylate cyclase (GGDEF domain) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
diguanylate cyclase
13_1_40cm_3_scaffold_682_2
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1575..1982)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NXX1_AROAE
hypothetical protein
Periplasmic protein {ECO:0000313|EMBL:AFR01888.1}; TaxID=1218933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium
13_1_40cm_3_scaffold_682_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1994..2914)
DNA (921bp) protein (307aa)
asparaginase family protein; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Peptidase T2, asparaginase 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU95_KORVE
peptidase T2, asparaginase 2
13_1_40cm_3_scaffold_682_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2987..3331)
DNA (345bp) protein (115aa)
Nucleic acid binding, OB-fold, tRNA/helicase-type n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65953.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nucleic acid binding, OB-fold, tRNA/helicase-type
13_1_40cm_3_scaffold_682_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3888..5603
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL13_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDM65337.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_682_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

5630..5851
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN82_CITK8
CsbD family protein Tax=RBG_16_Chloroflexi_63_12_curated
putative stress-response protein
13_1_40cm_3_scaffold_682_7

Not on your lists

6036..6815
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium FPPP_13C3 RepID=S4W4H2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGO87987.1}; TaxID=1343845 species="Bacteria; environmental samples.;" source="uncultured bacterium FPPP_13C3.;"
hypothetical protein
13_1_40cm_3_scaffold_682_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(6917..7795)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D9792
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_3_scaffold_682_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7863..8537)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT25_KORVE
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
LuxR family transcriptional regulator
13_1_40cm_3_scaffold_682_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(8530..10386)
DNA (1857bp) protein (619aa)
Putative signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT24_KORVE
signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
signal transduction histidine kinase
13_1_40cm_3_scaffold_682_11
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11864..13195
DNA (1332bp) protein (444aa)
General secretion pathway protein G id=2633580 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
General secretion pathway protein G Tax=GWC2_Deltaproteobacteria_65_14_curated
13_1_40cm_3_scaffold_682_12
unknown

Not on your lists

13198..14559
DNA (1362bp) protein (454aa)

This feature has no annotations

13_1_40cm_3_scaffold_682_13
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14667..16154)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKR5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62310.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8 and S53 subtilisin kexin sedolisin
13_1_40cm_3_scaffold_682_14
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16114..16914)
DNA (801bp) protein (267aa)
Beta-propeller repeat-containing protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TS95_BACAO
peptidase S8 and S53 subtilisin kexin sedolisin Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cell surface protein
13_1_40cm_3_scaffold_682_15
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16877..17461)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K527_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28004.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_40cm_3_scaffold_682_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18391
DNA (597bp) protein (199aa)
Fimbrial protein id=4628563 bin=GWC2_Deltaproteobacteria_66_88 species=Cardiobacterium valvarum genus=Cardiobacterium taxon_order=Cardiobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
N-terminal methylation; K02456 general secretion pathway protein G Tax=GWA2_Deltaproteobacteria_65_63_curated
13_1_40cm_3_scaffold_682_trna_1
unknown

Not on your lists

18496..18569
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_682_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18760..20616
DNA (1857bp) protein (619aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P28_SOLUE
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABJ88592.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Sol
13_1_40cm_3_scaffold_682_18
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

20616..21671
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_Planctomycetes_43_13_curated
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V3_ACIC5
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_40cm_3_scaffold_682_19
unknown

Not on your lists

comp(21724..22554)
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_40cm_3_scaffold_682_trna_2
unknown

Not on your lists

21733..21805
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_682_20
unknown

Not on your lists

22592..22837
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_682_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22955..24007
DNA (1053bp) protein (351aa)
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ABJ81364.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ABJ81364.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soli
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C52_SOLUE
13_1_40cm_3_scaffold_682_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

24096..25070
DNA (975bp) protein (325aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:ABJ81365.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABJ81365.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
13_1_40cm_3_scaffold_682_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25381..25917
DNA (537bp) protein (179aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_cura
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365A2B2
pdhB; dihydrolipoamide acetyltransferase
13_1_40cm_3_scaffold_682_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25976..26668
DNA (693bp) protein (231aa)
putative dihydrolipoamide acetyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-like enzyme (EC:2.3.1.61)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-like enzyme n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH10_CHLTF
13_1_40cm_3_scaffold_682_25
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26782..27699
DNA (918bp) protein (306aa)
Serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YS4_METBU
Serine O-acetyltransferase {ECO:0000313|EMBL:ABE51402.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococco
13_1_40cm_3_scaffold_682_26
unknown

Not on your lists

comp(27730..27930)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_3_scaffold_682_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27986..29836)
DNA (1851bp) protein (617aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU5_9BACT
phosphomethylpyrimidine synthase
13_1_40cm_3_scaffold_682_28
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(29966..30295)
DNA (330bp) protein (110aa)
iron-sulfur binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D6D6E
HesB/YadR/YfhF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
iron-sulfur cluster assembly accessory protein
Displaying items 1-30 of 42 in total

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