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13_1_40cm_3_scaffold_731

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_731_1
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1574)
DNA (1572bp) protein (524aa)
Acylamino-acid-releasing enzyme n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67MK6_SYMTH
acylamino acid-releasing protein
Acylamino-acid-releasing enzyme {ECO:0000313|EMBL:BAD41087.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium the
13_1_40cm_3_scaffold_731_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1584..2474)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I8QXG1_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
protein of unknown function DUF72
13_1_40cm_3_scaffold_731_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2783..3190
DNA (408bp) protein (136aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_731_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3813..4067
DNA (255bp) protein (85aa)
Putative gualylate cyclase protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPZ6_NOCSJ
putative gualylate cyclase protein
Putative gualylate cyclase protein {ECO:0000313|EMBL:ABL83881.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain
13_1_40cm_3_scaffold_731_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4064..4675)
DNA (612bp) protein (204aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uracil phosphoribosyltransferase id=3063049 bin=GWF2_CPR3_35_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_CPR3_35_18 organism_group=CPR3
upp; uracil phosphoribosyltransferase
13_1_40cm_3_scaffold_731_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4693..5952)
DNA (1260bp) protein (420aa)
serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GLYA_CARHZ
13_1_40cm_3_scaffold_731_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5949..6440)
DNA (492bp) protein (164aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribose-5-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=6 Tax=Clostridium thermocellum RepID=A3DIL8_CLOTH
13_1_40cm_3_scaffold_731_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6437..7027)
DNA (591bp) protein (197aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY83_THERP
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_3_scaffold_731_9
unknown

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comp(7024..7509)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_3_scaffold_731_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7532..7738)
DNA (207bp) protein (69aa)
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cold shock protein CspA family protein id=14424909 bin=bin1_lowGC species=Enterococcus durans genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cold shock protein scoF
13_1_40cm_3_scaffold_731_11
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(8084..8848)
DNA (765bp) protein (255aa)
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72); K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=14628283 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72); K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CSP1_4_Chloroflexi
protein-(glutamine-N5) methyltransferase
13_1_40cm_3_scaffold_731_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8966..10009
DNA (1044bp) protein (348aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0S4_9FIRM
13_1_40cm_3_scaffold_731_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10106..10486
DNA (381bp) protein (127aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
hypothetical protein id=24584354 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_731_14
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10564..11949
DNA (1386bp) protein (462aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQP5_GEOS8 rbh
C69 family peptidase; K03568 TldD protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
peptidase U62 modulator of DNA gyrase
13_1_40cm_3_scaffold_731_15
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12016..13368
DNA (1353bp) protein (451aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DLW7_9FIRM
peptidase U62 modulator of DNA gyrase
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:AEF94971.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum
13_1_40cm_3_scaffold_731_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13370..14314
DNA (945bp) protein (315aa)
nitrogenase subunit NifH (ATPase)-like protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein id=4213169 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_3_scaffold_731_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14428..15267
DNA (840bp) protein (280aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_731_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15264..16076
DNA (813bp) protein (271aa)
undecaprenyl-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
undecaprenyl-diphosphatase UppP
Undecaprenyl-diphosphatase id=3309641 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
13_1_40cm_3_scaffold_731_19
unknown

Not on your lists

comp(16387..16488)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_3_scaffold_731_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16947..17777
DNA (831bp) protein (277aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ5_SPHTD
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_731_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17782..19128
DNA (1347bp) protein (449aa)
nicotinic acid phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Quinolinate phosphoribosyl transferase id=3927067 bin=GWF2_Lentisphaerae_57_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nicotinic acid phosphoribosyltransferase
13_1_40cm_3_scaffold_731_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19107..19847
DNA (741bp) protein (247aa)
glutamine amidotransferase; K07090 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein; K07090 id=24435617 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_3_scaffold_731_23
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19904..20146
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDV1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82863.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_3_scaffold_731_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20397..20885
DNA (489bp) protein (163aa)
metallo-beta-lactamase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metallo-beta-lactamase-like protein id=14628680 bin=bin8_Chloro species=Streptomyces sp. ATexAB-D23 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
beta-lactamase domain-containing protein
13_1_40cm_3_scaffold_731_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20888..23425
DNA (2538bp) protein (846aa)
AMP-binding enzyme/acyltransferase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
AMP-dependent synthetase and ligase:phospholipid/glycerol acyltransferase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14628681 bin=bin8_Chloro species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi rbh
acyl-(acyl carrier protein) ligase, acyl carrier, [acyl-]glycerolphosphate acyltransferase fusion protein
13_1_40cm_3_scaffold_731_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(23814..24776)
DNA (963bp) protein (321aa)
putative L-asparaginase; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative L-asparaginase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9M0_CALAS
putative L-asparaginase
13_1_40cm_3_scaffold_731_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(24776..25228)
DNA (453bp) protein (151aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14626844 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_731_28
unknown

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25247..25588
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_3_scaffold_731_29
unknown

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comp(25575..26186)
DNA (612bp) protein (204aa)

This feature has no annotations

Displaying 29 items

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