ggKbase home page

13_1_40cm_3_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_73_1
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2..532
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQI9_9BACT
protein tyrosine phosphatase
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ38510.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
13_1_40cm_3_scaffold_73_2
unknown

Not on your lists

605..778
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_3_scaffold_73_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

775..2097
DNA (1323bp) protein (441aa)
Uncharacterized protein {ECO:0000313|EMBL:EON74705.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
13_1_40cm_3_scaffold_73_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2353..2703
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B90_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81676.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_3_scaffold_73_5
unknown

Not on your lists

comp(2545..2925)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_3_scaffold_73_6
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3001..3378
DNA (378bp) protein (126aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=CG_Delta_03
Holo-[acyl-carrier-protein] synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6D0_TERSS
holo-acyl-carrier-protein synthase
13_1_40cm_3_scaffold_73_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3362..3643)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036353FF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_1_40cm_3_scaffold_73_8
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3645..4151)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K7Y3_BURCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA93424.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
13_1_40cm_3_scaffold_73_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4123..5745)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F5B8D
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
AMP-dependent synthetase and ligase
13_1_40cm_3_scaffold_73_10
unknown

Not on your lists

5778..6023
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_73_11
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6120..7394
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L556_MAGSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK43099.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus ma
13_1_40cm_3_scaffold_73_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7467..8456)
DNA (990bp) protein (330aa)
Polysaccharide deacetylase n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FZC9_METM5
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDM65182.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
polysaccharide deacetylase
13_1_40cm_3_scaffold_73_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8629..9822)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000361551D
non-ribosomal peptide synthetase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
non-ribosomal peptide synthetase MelG
13_1_40cm_3_scaffold_73_14
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(10038..11285)
DNA (1248bp) protein (416aa)
DegT/DnrJ/EryC1/StrS family protein Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
DegT/DnrJ/EryC1/StrS family protein
DegT/DnrJ/EryC1/StrS family protein id=3283124 bin=GWC2_Methylomirabilis_70_24 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_3_scaffold_73_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11275..12264)
DNA (990bp) protein (330aa)
NAD-dependent dehydratase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626632 rbh
NAD-dependent dehydratase {ECO:0000313|EMBL:EWT07549.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens
NAD-dependent dehydratase
13_1_40cm_3_scaffold_73_16
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12261..13313)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026269F5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM44402.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
nucleotidyl transferase
13_1_40cm_3_scaffold_73_17
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13298..13951)
DNA (654bp) protein (218aa)
Acetyltransferase {ECO:0000313|EMBL:EWC59122.1}; EC=2.3.1.- {ECO:0000313|EMBL:EWC59122.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" s
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000362DB0A
acetyltransferase
13_1_40cm_3_scaffold_73_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13948..15096)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z4M7_9PROT
UDP-N-acetyl-D-glucosamine 2-epimerase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_1_40cm_3_scaffold_73_19
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..16804)
DNA (1716bp) protein (572aa)
Sialic acid synthase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB91_MAGSA
sialic acid synthase
Sialic acid synthase {ECO:0000313|EMBL:BAE48884.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirill
13_1_40cm_3_scaffold_73_20
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17182..18219
DNA (1038bp) protein (346aa)
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000313|EMBL:CCP26731.1}; EC=2.3.1.180 {ECO:0000313|EMBL:CCP26731.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
3-oxoacyl-(Acyl-carrier-protein) synthase 3 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXA8_TEPAE
13_1_40cm_3_scaffold_73_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18237..18488
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP55131.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
13_1_40cm_3_scaffold_73_22
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

18490..19041
DNA (552bp) protein (184aa)
acpS; holo-[acyl-carrier-protein] synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUI0_DESRL
holo-(acyl-carrier-protein) synthase
13_1_40cm_3_scaffold_73_23
unknown

Not on your lists

19076..20236
DNA (1161bp) protein (387aa)

This feature has no annotations

13_1_40cm_3_scaffold_73_24
unknown

Not on your lists

20320..20634
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_73_25
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20624..22528
DNA (1905bp) protein (635aa)
Putative spore coat polysaccharide biosynthesis protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5NDX3_9BACI
Spore coat polysaccharide biosynthesis protein SpsB {ECO:0000313|EMBL:ETT56648.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibac
13_1_40cm_3_scaffold_73_26

Not on your lists

22551..24425
DNA (1875bp) protein (625aa)
Lipid A ABC exporter {ECO:0000313|EMBL:AHZ45570.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter related protein id=4942827 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
ABC transporter permease
13_1_40cm_3_scaffold_73_27
R_RIF_OD1_13_60_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

24388..25383
DNA (996bp) protein (332aa)
Polysaccharide deacetylase n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XJ15_MYCNE
polysaccharide deacetylase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_60_25_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_73_28
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25422..26750)
DNA (1329bp) protein (443aa)
Group 1 glycosyl transferase n=2 Tax=Halorubrum distributum RepID=M0EF26_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:ELZ45673.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM
putative glycosyltransferase
13_1_40cm_3_scaffold_73_29
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26747..27865)
DNA (1119bp) protein (373aa)
Glycosyl transferase group 1 id=2302451 bin=GWB2_Desulfobacterales_56_26 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
group 1 glycosyl transferase Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
13_1_40cm_3_scaffold_73_30
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28202..29437)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000377ACD7
Uncharacterized protein {ECO:0000313|EMBL:KFC71495.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy