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13_1_40cm_3_scaffold_718

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_718_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..522)
DNA (522bp) protein (174aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_718_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(860..1954)
DNA (1095bp) protein (365aa)
Malate/L-lactate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEH6_THET1
malate/L-lactate dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
malate/L-lactate dehydrogenase
13_1_40cm_3_scaffold_718_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2041..2562
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000375BB7F
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AIF84056.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaer
13_1_40cm_3_scaffold_718_4
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3142..3873)
DNA (732bp) protein (244aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=667138 species="Archaea; Euryarch
GTP cyclohydrolase-2 n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNU5_9EURY
GTP cyclohydrolase
13_1_40cm_3_scaffold_718_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(4419..5741)
DNA (1323bp) protein (441aa)
Signal recognition particle 54 kDa protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFZ7_9EURY
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Archaea_50_20_curated
Signal recognition particle GTPase
13_1_40cm_3_scaffold_718_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(5743..6657)
DNA (915bp) protein (305aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RBG_16_Bathyarchaeota_48_13_curated
deoxyhypusine synthase (EC:2.5.1.46)
Probable deoxyhypusine synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX03_METFV
13_1_40cm_3_scaffold_718_7
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(6716..7111)
DNA (396bp) protein (132aa)
Translation initiation factor 5A n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEJ4_PYRF1
eIF-5A; translation initiation factor 5A Tax=RBG_16_Bathyarchaeota_48_13_curated
translation initiation factor eIF-5A
13_1_40cm_3_scaffold_718_8
RBG_16_Archaea_50_20_curated, Archaea

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7225..8064
DNA (840bp) protein (280aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RBG_16_Archaea_50_20_curated
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=PPNK_METST
13_1_40cm_3_scaffold_718_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8061..8576
DNA (516bp) protein (172aa)
Putative nucleic acid-binding protein with PIN domain and Zn ribbon n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9X9_9EURY
PilT protein domain protein; K07060 UPF0271 protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
Nob1p-like protein
13_1_40cm_3_scaffold_718_10
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(8573..9766)
DNA (1194bp) protein (398aa)
PncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinic acid phosphoribosyltransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVI9_METKA
Nicotinic acid phosphoribosyltransferase {ECO:0000313|EMBL:AAM02613.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus
13_1_40cm_3_scaffold_718_11
RBG_16_Archaea_50_20_curated, Archaea

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9898..10521
DNA (624bp) protein (208aa)
PyrE-like protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T646_METSL
Orotate phosphoribosyltransferase protein Tax=RBG_16_Archaea_50_20_curated
PyrE-like protein
13_1_40cm_3_scaffold_718_12
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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11017..12603
DNA (1587bp) protein (529aa)
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:BAJ47633.1}; EC=1.5.1.12 {ECO:0000313|EMBL:BAJ47633.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatu
1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R4_9ARCH
13_1_40cm_3_scaffold_718_13
unknown

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13157..13312
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_3_scaffold_718_14
unknown

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comp(13398..13946)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_3_scaffold_718_15
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(14137..15030)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30161_ARCFU
hypothetical protein Tax=CG_Anaero_01
Single-stranded DNA-specific exonuclease
13_1_40cm_3_scaffold_718_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(15120..16187)
DNA (1068bp) protein (356aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_38_9_curated
Fmu (Sun) domain protein n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SPP1_IGNAA
Fmu (Sun) domain-containing protein
13_1_40cm_3_scaffold_718_17
unknown

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16376..16564
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_718_18
unknown

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16708..16998
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_3_scaffold_718_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17005..19923)
DNA (2919bp) protein (973aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=926571 species="Archaea; Thaumarc
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=14427140 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_3_scaffold_718_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19927..21111)
DNA (1185bp) protein (395aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_13_Bathyarchaeota_38_9_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PUH2_METTM
13_1_40cm_3_scaffold_718_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(21204..22646)
DNA (1443bp) protein (481aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=uncultured crenarchaeote RepID=H5SJ27_9CREN
13_1_40cm_3_scaffold_718_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(22765..23073)
DNA (309bp) protein (103aa)
50S ribosomal protein L12 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RL12_PYRHO
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_3_scaffold_718_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(23184..24050)
DNA (867bp) protein (289aa)
50S ribosomal protein L10 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IGU2_NITGG
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
rpl10p; acidic ribosomal protein P0
13_1_40cm_3_scaffold_718_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(24056..24715)
DNA (660bp) protein (220aa)
50S ribosomal protein L1 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB5_METFV
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L1
13_1_40cm_3_scaffold_718_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(24728..25120)
DNA (393bp) protein (131aa)
50S ribosomal protein L11 n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCQ7_9CREN
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Bathyarchaeota_38_9_curated
LSU ribosomal protein L12e (L11p)
13_1_40cm_3_scaffold_718_26
RBG_16_Archaea_50_20_curated, Archaea

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comp(25194..25688)
DNA (495bp) protein (165aa)
Transcription elongation factor Spt5 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B924_METTP
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_3_scaffold_718_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(25705..25908)
DNA (204bp) protein (68aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_718_28
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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26131..26400
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_3_scaffold_718_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(26462..27367)
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus sp. CL1 RepID=I3ZRA0_9EURY
signal recognition particle GTPase Tax=RBG_16_Archaea_50_20_curated
signal recognition particle GTPase
13_1_40cm_3_scaffold_718_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(27360..27833)
DNA (474bp) protein (158aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
Displaying items 1-30 of 42 in total

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