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13_1_40cm_3_scaffold_1325_9

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6658..8406)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor rpod; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 582.0
  • Bit_score: 922
  • Evalue 3.40e-265
RNA polymerase sigma factor id=1890656 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 559.0
  • Bit_score: 900
  • Evalue 9.90e-259
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 582.0
  • Bit_score: 659
  • Evalue 6.30e-187

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGAAGGAGGTCAAGAAGCTCATCGATCTGGGTAAAGAAAAGGGCTATTTGACCTATGACGACGTCAACGACATGCTCCCCGCCGAAGTCGTATCGCCCGATCAGATCGACGATGTCATGTCCATTTTTGGGGAAATGGACATTGAAGTTGTCGATGCCAACCAAAGGGTGAGTCTTGGTAGCGCTGGCGAGGAGCTGGCCGAAGAGGAGGAAGAAGAAAAGGAAATCGATAGCGACGTTGAAGGCGATATGGTCGGCAAGACCGGTGATCCCGTGCGGATGTACCTGCGTGAAATGGGAACGGTCTCTCTTCTGAGCCGTGAGGGCGAGGTCGAGATCGCCAAGAAAATCGAAGAGGGAGAAAAACAGGTTATCGATGAAGTGCTATCAAGCCCGTTGGCGTTAACTTACGTTCTTGAGCTGGGGGAAAAACTGGCGCAGCACGAGATCCGTGTCCGGGAGATTATTAAAGAGGAAGGCGAGGAAGAAGCCGAATATCTCGAGAACGAAGAGGTACATGAAAAGCGGTTGCTCGATCAAATAGGAAAAATTCGGCGTACCGCCAATGATAAAGAAAAAATCAAAAGGCAGCTGGAGGCAAGGAGGCTTTCGGCGCAACGACGCGACGCGCTCCTGGAGAGCCTGGCTAAAAATCAAGTAAAGCTCATCAATGGCCTGAAAGCGCTTCAGCTCAATCGCAGACAGACGGAAGCCATCGCCGAAGGACTGAAGAAGGCGATGGATAGGATGCAGACTTTTGAACGACGCATCAAGGATTTCGAGTTGAAAACCGGGAAACCGTCTACCGAAGTGCTAAAACTGGTGTCAGGGCTTAACGGGCGCAAGCGGGATTGGCACCGGATCATGGGCTCGCTTCGCATGGGACACGACGCGATTCTCAACATGGTGGAGGAGATCAAGAATGCGCGGCGTGACATCAAACATATCGAGAGAGATTTGGAAATGCCGGCCGAGGAGATCAAGCGGCGCGTCTGGTCGATCATTGAAGGTGAAACCAAAGCGAATTTGGCAAAGAAAGAGCTGATCGAAGCCAATTTACGTTTGGTCGTAAGCATTGCGAAGAAATACACCAACCGGGGACTGCAGTTCTTGGATCTGATCCAGGAAGGTAATATCGGTTTGATGAAAGCGGTCGATAAGTTCGAATATCAGCGAGGTTATAAATTCTCCACCTACGCCACATGGTGGATCCGTCAAGCCATTACCCGGGCAATTGCCGATCAGGCGCGAACCATTCGCATCCCGGTCCATATGATTGAAACCATCAACAAATTGATCCGTACTTCGCGATATCTGGTTCAGGAGATTGGACGGGAACCGACCCCGGAGGAGATTGCCACCAAGATGGAGATTCCTTTGGATAAGGTGCGGAAGGTTCTCAAGATCGCCAAAGAGCCGATCTCATTGGAAACTCCCGTCGGCGAAGAAGAAGATAGCCATCTGGGTGATTTTATCGAAGACAAACGAATCATCACGCCTTCGGATGCGGTCGTCAATATCAACCTCCAGGAACAAACACGAAAGGTTTTGGCCACGCTCACGCCGCGCGAGGAGCAGGTACTGCGCATGCGCTTCGGCATTGGCGAAAAATCCGATCATACTTTGGAAGAAGTGGGTCAAAAGTTTACCGTCACGCGCGAGCGCATACGCCAGATCGAAGCCAAAGCATTGCGGAAGCTCAGGCACCCAAGCCGCAGCAAGCGGCTCAAGAGCTTCATGGAAAACTAA
PROTEIN sequence
Length: 583
MKEVKKLIDLGKEKGYLTYDDVNDMLPAEVVSPDQIDDVMSIFGEMDIEVVDANQRVSLGSAGEELAEEEEEEKEIDSDVEGDMVGKTGDPVRMYLREMGTVSLLSREGEVEIAKKIEEGEKQVIDEVLSSPLALTYVLELGEKLAQHEIRVREIIKEEGEEEAEYLENEEVHEKRLLDQIGKIRRTANDKEKIKRQLEARRLSAQRRDALLESLAKNQVKLINGLKALQLNRRQTEAIAEGLKKAMDRMQTFERRIKDFELKTGKPSTEVLKLVSGLNGRKRDWHRIMGSLRMGHDAILNMVEEIKNARRDIKHIERDLEMPAEEIKRRVWSIIEGETKANLAKKELIEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIATKMEIPLDKVRKVLKIAKEPISLETPVGEEEDSHLGDFIEDKRIITPSDAVVNINLQEQTRKVLATLTPREEQVLRMRFGIGEKSDHTLEEVGQKFTVTRERIRQIEAKALRKLRHPSRSKRLKSFMEN*