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13_1_40cm_3_scaffold_17684_8

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(5800..6156)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EPE3_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 117.0
  • Bit_score: 69
  • Evalue 2.00e-09
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 117.0
  • Bit_score: 71
  • Evalue 2.60e-10
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:AFT99281.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 117.0
  • Bit_score: 71
  • Evalue 1.30e-09

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Taxonomy

Nocardia brasiliensis → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GTGCTCGAGATCGATCCCGCTACCTACCGCAAGCGTCTCTCCCGCGCGCGGGTTCGCCTCCACGATTTCCTTCGCGGCTGGTGCGGCGTATTCGACGAGGCGAATCCGTGTCGCTGTGCAGGGCAGGTTGAGTGTGCGGTCGAGCGAGGATTGCTCGCTGCCGACGACCTGTTCCTCTCGAGGCAGCTGACAGGGCCGACGAATGCCGAATTGAATCGAGCGACCGACGAGGTCACGAGCCTGATGCATGTTGCGGAAGTGATGCGTGGTCCATCGACCTGGCTCGCGCCGGGCTCGATGGTGAAGGCCTTGCGCGAGCTCGTCGACTCGCAACGACTCGAGCTCTTCCGTTCATAA
PROTEIN sequence
Length: 119
VLEIDPATYRKRLSRARVRLHDFLRGWCGVFDEANPCRCAGQVECAVERGLLAADDLFLSRQLTGPTNAELNRATDEVTSLMHVAEVMRGPSTWLAPGSMVKALRELVDSQRLELFRS*