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13_1_40cm_2_scaffold_10689

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10689_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1339
DNA (1338bp) protein (446aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Multi-sensor signal transduction histidine kinase id=4686862 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_10689_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1332..2714
DNA (1383bp) protein (461aa)
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pilR; regulator protein pilR; K02667 two-component system, NtrC family, response regulator PilR id=14625676 bin=bin7_NC10_sister species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pilR; transcriptional regulatory protein pilR
13_1_40cm_2_scaffold_10689_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2959..3375
DNA (417bp) protein (139aa)
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Fimbrial protein pilin id=4953732 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial protein pilin
13_1_40cm_2_scaffold_10689_4
unknown

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comp(3362..3985)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_2_scaffold_10689_5
unknown

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comp(4130..5059)
DNA (930bp) protein (310aa)

This feature has no annotations

13_1_40cm_2_scaffold_10689_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5497..6294
DNA (798bp) protein (266aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme id=4383531 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prepilin peptidase
13_1_40cm_2_scaffold_10689_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6267..6731
DNA (465bp) protein (155aa)
Putative type 4 fimbrial pilin related transmembrane protein id=4953736 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative type 4 fimbrial pilin related transmembrane protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_10689_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6728..7165
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4953737 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_10689_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7119..7676
DNA (558bp) protein (186aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4953740 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 9 items

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