ggKbase home page

13_1_40cm_2_scaffold_12172

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_12172_1
unknown

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_2_scaffold_12172_2
unknown

Not on your lists

comp(379..828)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_2_scaffold_12172_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(869..1741)
DNA (873bp) protein (291aa)
ABC transport system permease protein YcjP id=4964308 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_12172_4
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1741..2724)
DNA (984bp) protein (328aa)
ABC transport system permease protein y4oQ n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETE9_CUPNN
ABC transporter permease
ABC transport system permease protein y4oQ {ECO:0000313|EMBL:AEI75620.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
13_1_40cm_2_scaffold_12172_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(2729..4060)
DNA (1332bp) protein (444aa)
Putative ABC-type sugar transport system,periplasmic-binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ66_9CHLR
Putative ABC-type sugar transport system,periplasmic-binding component {ECO:0000313|EMBL:CCF84728.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
extracellular solute-binding protein
13_1_40cm_2_scaffold_12172_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4188..4568
DNA (381bp) protein (127aa)
id=3020265 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3020265 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12172_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4570..4788)
DNA (219bp) protein (73aa)
id=3742536 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_12172_8
Entamoeba histolytica, Entamoeba, Eukaryota

Not on your lists

comp(4883..5491)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Entamoeba histolytica RepID=S0AZC5_ENTHI
Uncharacterized protein {ECO:0000313|EMBL:BAN39601.1}; TaxID=5759 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba histolytica.;"
infB; Translation initiation factor IF-2
13_1_40cm_2_scaffold_12172_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5620..6522
DNA (903bp) protein (301aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3020269 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
13_1_40cm_2_scaffold_12172_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6536..7747
DNA (1212bp) protein (404aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (APGAM) id=3020272 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_12172_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8011..9207
DNA (1197bp) protein (399aa)
aspartate ammonia-lyase (EC:4.2.1.2); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fumarate hydratase class II id=4866639 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aspartate ammonia-lyase
13_1_40cm_2_scaffold_12172_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9251..9388
DNA (138bp) protein (46aa)
Phosphoesterase RecJ domain protein id=4232773 bin=GWC2_Methylomirabilis_70_16 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphoesterase domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
Displaying 12 items

View Taxonomy