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13_1_40cm_2_scaffold_10998

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10998_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..1100)
DNA (1098bp) protein (366aa)
monooxygenase FAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Flavin-dependent dehydrogenase id=2980067 bin=GWC2_Methylomirabilis_70_16 species=Xanthomonas gardneri genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
conserved hypothetical protein
13_1_40cm_2_scaffold_10998_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1097..2038)
DNA (942bp) protein (314aa)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyltransferase involved in cell wall biogenesis id=3870373 bin=GWF2_Methylomirabilis_70_14 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_1_40cm_2_scaffold_10998_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2090..3112)
DNA (1023bp) protein (341aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-(ACP) synthase-like protein
13_1_40cm_2_scaffold_10998_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3115..4290)
DNA (1176bp) protein (392aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Rokubacteria_70_23_curated
3-oxoacyl-ACP synthase (EC:2.3.1.179)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_10998_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4287..4562)
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_10998_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4570..5043)
DNA (474bp) protein (158aa)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative 3-oxoacyl-ACP synthase I id=14627961 bin=bin7_NC10_sister species=Streptomyces rapamycinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_10998_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5402..6565)
DNA (1164bp) protein (388aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_10998_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6665..7498)
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_10998_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7540..8526
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pyrD; dihydroorotate dehydrogenase PyrD
Displaying 9 items

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