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13_1_40cm_2_scaffold_1250

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1250_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14625567 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
branched-chain amino acid ABC transporter ATPase
13_1_40cm_2_scaffold_1250_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(207..1220)
DNA (1014bp) protein (338aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625568 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
inner-membrane translocator
13_1_40cm_2_scaffold_1250_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1217..2092)
DNA (876bp) protein (292aa)
livH-3; branched-chain amino acid ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
livH-3; branched-chain amino acid ABC transporter permease id=14625569 bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
13_1_40cm_2_scaffold_1250_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2092..4359)
DNA (2268bp) protein (756aa)
solute binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative uncharacterized protein id=14625570 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_1250_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4443..5813)
DNA (1371bp) protein (457aa)
branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein id=14625571 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
branched chain amino acid ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_1250_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

6001..6651
DNA (651bp) protein (217aa)
id=14625572 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
id=14625572 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_1250_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6639..7025)
DNA (387bp) protein (129aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein id=14626718 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_1250_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7022..7312)
DNA (291bp) protein (97aa)
prevent-host-death protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Prevent-host-death protein id=4592692 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death protein
13_1_40cm_2_scaffold_1250_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7397..7921)
DNA (525bp) protein (175aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-] Tax=GWA2_Rokubacteria_73_35_curated
Intracellular protease, PfpI family id=4900374 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Pfpi family intracellular protease
13_1_40cm_2_scaffold_1250_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7935..8105)
DNA (171bp) protein (57aa)
Putative regulatory protein, FmdB family id=4900375 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_1250_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(8136..9587)
DNA (1452bp) protein (484aa)
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] id=14430442 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
succinate-semialdehyde dehydrogenase
13_1_40cm_2_scaffold_1250_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9704..11044)
DNA (1341bp) protein (447aa)
amidase Tax=GWA2_Rokubacteria_73_35_curated
amidase id=14430439 bin=bin3_NC10 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
amidase
13_1_40cm_2_scaffold_1250_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11076..12020)
DNA (945bp) protein (315aa)
TRAP C4-dicarboxylate transport system permease DctM Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative TRAP-type C4-dicarboxylate transport system, large permease component id=4900377 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 13 items

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