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13_1_40cm_2_scaffold_12334

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_12334_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..237
DNA (237bp) protein (79aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Stage V sporulation protein E id=4599630 bin=GWC2_Methylomirabilis_70_16 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ftsW; essential cell division protein (stabilizes FtsZ ring)
13_1_40cm_2_scaffold_12334_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

230..1630
DNA (1401bp) protein (467aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=14625504 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
murC; UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_2_scaffold_12334_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1624..2502
DNA (879bp) protein (293aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4191405 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12334_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2502..3347
DNA (846bp) protein (282aa)
polypeptide-transport-associated domain-containing protein; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polypeptide-transport-associated domain protein FtsQ-type id=4191404 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polypeptide-transport-associated domain-containing protein
13_1_40cm_2_scaffold_12334_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3347..4591
DNA (1245bp) protein (415aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cell division protein ftsA id=4191403 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ftsA; cell division protein FtsA
13_1_40cm_2_scaffold_12334_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4695..5852
DNA (1158bp) protein (386aa)
Cell division protein FtsZ id=4191402 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ftsZ; cell division protein ftsZ Tax=GWA2_Rokubacteria_73_35_curated
ftsZ; cell division protein ftsZ
13_1_40cm_2_scaffold_12334_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5883..6641
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=4191401 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_2_scaffold_12334_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6756..7454
DNA (699bp) protein (233aa)
hypothetical protein; K06997 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K06997 id=14625496 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alanine racemase domain-containing protein
13_1_40cm_2_scaffold_12334_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7451..8215
DNA (765bp) protein (255aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase id=4599706 bin=GWC2_Methylomirabilis_70_16 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_12334_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8220..8525
DNA (306bp) protein (102aa)
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1871976 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_12334_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8542..9015
DNA (474bp) protein (158aa)
hypothetical protein; K04074 cell division initiation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cell-division initiation protein; K04074 cell division initiation protein id=14625493 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cell division protein DivIVA
13_1_40cm_2_scaffold_12334_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8987..9274
DNA (288bp) protein (96aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4599709 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_12334_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9271..10311
DNA (1041bp) protein (347aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase id=3779777 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12334_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10355..11941
DNA (1587bp) protein (529aa)
SagB-type dehydrogenase domain protein id=3779776 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SagB-type dehydrogenase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_12334_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11938..13080
DNA (1143bp) protein (381aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45) Tax=GWA2_Rokubacteria_73_35_curated
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase id=3779775 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_40cm_2_scaffold_12334_16
unknown

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13077..13295
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_12334_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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13262..14608
DNA (1347bp) protein (449aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) Tax=CSP1_6_Rokubacteria
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) id=14625486 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
13_1_40cm_2_scaffold_12334_18
unknown

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comp(14598..14846)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 18 items

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