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13_1_40cm_2_scaffold_10149

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10149_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..622)
DNA (621bp) protein (207aa)
Luciferase-like, subgroup id=3362957 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like protein
13_1_40cm_2_scaffold_10149_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(626..1393)
DNA (768bp) protein (256aa)
Enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase id=3362958 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
13_1_40cm_2_scaffold_10149_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1390..2961)
DNA (1572bp) protein (524aa)
menE1; 2-succinylbenzoate--CoA ligase (EC:6.2.1.26) Tax=GWA2_Rokubacteria_73_35_curated
AMP-dependent synthetase and ligase id=3362959 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_10149_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2958..3986)
DNA (1029bp) protein (343aa)
putative NAD-dependent alcohol dehydrogenase (EC:1.1.1.1) Tax=GWA2_Rokubacteria_73_35_curated
putative NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
Putative NAD-dependent alcohol dehydrogenase id=3362960 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_10149_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4000..5325)
DNA (1326bp) protein (442aa)
Phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase id=4585789 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_10149_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5337..5777)
DNA (441bp) protein (147aa)
carbon monoxide dehydrogenase subunit G; K09386 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carbon monoxide dehydrogenase subunit G id=3362961 bin=GWA2_Methylomirabilis_73_35 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbon monoxide dehydrogenase subunit G
13_1_40cm_2_scaffold_10149_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5826..7025)
DNA (1200bp) protein (400aa)
aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
Aspartate aminotransferase A (AspAT) id=4834180 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_10149_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7059..7544)
DNA (486bp) protein (162aa)
pantetheine-phosphate adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Phosphopantetheine adenylyltransferase id=3362963 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
phosphopantetheine adenylyltransferase
13_1_40cm_2_scaffold_10149_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7555..8013)
DNA (459bp) protein (153aa)
Methyltransferase id=3362964 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
methyltransferase
13_1_40cm_2_scaffold_10149_10
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8145..9728
DNA (1584bp) protein (528aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71247.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
seg 47..58 id=1247086 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_2_scaffold_10149_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


10231..10422
DNA (192bp) protein (64aa)
50S ribosomal protein L28 id=2537538 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWA2_Rokubacteria_70_23_curated
50S ribosomal protein L28
13_1_40cm_2_scaffold_10149_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10596..11645)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14627009 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_10149_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11736..13430)
DNA (1695bp) protein (565aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627504 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_1_40cm_2_scaffold_10149_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13450..13542)
DNA (93bp) protein (31aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 14 items

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