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13_1_40cm_2_scaffold_12358

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_12358_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..500)
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=2589434 bin=GWA2_Methylomirabilis_73_35 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
protein of unknown function DUF35 Tax=GWA2_Rokubacteria_73_35_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_40cm_2_scaffold_12358_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(505..1635)
DNA (1131bp) protein (377aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=GWA2_Rokubacteria_73_35_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Putative lipid-transfer protein id=2589435 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_12358_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2515..2907)
DNA (393bp) protein (131aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Twin-arginine translocation pathway signal id=2589436 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MFS transporter
13_1_40cm_2_scaffold_12358_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3693..6479)
DNA (2787bp) protein (929aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Excinuclease ABC, subunit A id=4232696 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
uvrA; excinuclease ABC subunit A
13_1_40cm_2_scaffold_12358_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6595..7062
DNA (468bp) protein (156aa)
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, Fur family id=2589439 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferric-uptake regulator
13_1_40cm_2_scaffold_12358_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7066..7515
DNA (450bp) protein (150aa)
rbr; rubrerythrin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Rubrerythrin id=2589440 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbr; rubrerythrin
13_1_40cm_2_scaffold_12358_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7704..7931
DNA (228bp) protein (76aa)
putative ferredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Fe-S oxidoreductase id=2589441 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ferredoxin
Displaying 7 items

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