ggKbase home page

13_1_40cm_2_scaffold_14482

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14482_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4388292 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_14482_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(405..1805)
DNA (1401bp) protein (467aa)
putative heme d1 biosynthesis radical SAM protein NirJ2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM protein id=14626559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM protein
13_1_40cm_2_scaffold_14482_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1944..2099)
DNA (156bp) protein (52aa)
putative universal stress protein UspA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative universal stress protein UspA id=14626558 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_14482_4
unknown

Not on your lists

2236..2502
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_14482_5
unknown

Not on your lists

2608..2793
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_2_scaffold_14482_6
unknown

Not on your lists

3274..3423
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_2_scaffold_14482_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3801..4457)
DNA (657bp) protein (219aa)
putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative lipoprotein id=4083660 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative lipoprotein
13_1_40cm_2_scaffold_14482_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4544..4912)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F3656
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_2_scaffold_14482_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4944..5273)
DNA (330bp) protein (110aa)
Caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Caa(3)-type oxidase, subunit IV id=4083662 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
caa(3)-type oxidase, subunit IV
13_1_40cm_2_scaffold_14482_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5286..5903)
DNA (618bp) protein (206aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=GWA2_Rokubacteria_73_35_curated
Cytochrome c oxidase subunit III id=4083665 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c oxidase subunit III
13_1_40cm_2_scaffold_14482_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5956..6639)
DNA (684bp) protein (228aa)
cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cytochrome c oxidase subunit III subfamily id=4083670 bin=GWA2_Methylomirabilis_73_35 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme/copper-type cytochrome/quinol oxidase, subunit 3 Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_14482_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6877..7818)
DNA (942bp) protein (314aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) Tax=GWA2_Rokubacteria_73_35_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=4083674 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_14482_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7815..8687)
DNA (873bp) protein (291aa)
Cytochrome oxidase assembly Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative Cytochrome oxidase assembly id=4083676 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome oxidase assembly
13_1_40cm_2_scaffold_14482_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8714..10399)
DNA (1686bp) protein (562aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14627498 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10 rbh
cytochrome c oxidase subunit I (EC:1.9.3.1)
Displaying 14 items

View Taxonomy