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13_1_40cm_2_scaffold_16820

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_16820_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..86)
DNA (84bp) protein (28aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_16820_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(87..542)
DNA (456bp) protein (152aa)
CoA-binding domain protein id=4472625 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA-binding domain-containing protein; K06929 Tax=GWA2_Rokubacteria_73_35_curated
CoA-binding domain-containing protein
13_1_40cm_2_scaffold_16820_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(557..1636)
DNA (1080bp) protein (360aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=GWA2_Rokubacteria_73_35_curated
3'-5' exonuclease id=4472621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3'-5' exonuclease
13_1_40cm_2_scaffold_16820_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1696..2502)
DNA (807bp) protein (269aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4472514 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain dehydrogenase
13_1_40cm_2_scaffold_16820_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2756..3187
DNA (432bp) protein (144aa)
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Endoribonuclease L-PSP id=4472509 bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
13_1_40cm_2_scaffold_16820_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3390..4280
DNA (891bp) protein (297aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
6-phosphogluconate dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
2-hydroxy-3-oxopropionate reductase id=4918773 bin=GWC2_Methylomirabilis_70_24 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_1_40cm_2_scaffold_16820_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4287..4868)
DNA (582bp) protein (194aa)
Predicted protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted protein id=4472501 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_16820_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4870..6216)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein id=4472500 bin=GWA2_Methylomirabilis_73_35 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_16820_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6247..6540)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=3956441 bin=GWC2_Methylomirabilis_70_16 species=Bilophila sp. 4_1_30 genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Putative uncharacterized protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_16820_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7758..10535
DNA (2778bp) protein (926aa)
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWA2_Rokubacteria_73_35_curated
Methionine synthase id=4620328 bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methionine synthase
Displaying 10 items

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