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13_1_40cm_2_scaffold_18602

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_18602_1
unknown

Not on your lists

comp(260..427)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_2_scaffold_18602_2
unknown

Not on your lists

912..1199
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_2_scaffold_18602_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1295..1675)
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_2_scaffold_18602_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1668..2822)
DNA (1155bp) protein (385aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
acetyl-CoA C-acyltransferase 8 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Propanoyl-CoA C-acyltransferase id=2338963 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_18602_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2880..3839
DNA (960bp) protein (320aa)
Predicted dehydrogenases and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative dehydrogenase
13_1_40cm_2_scaffold_18602_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3833..5536
DNA (1704bp) protein (568aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
serine/threonine protein kinase
13_1_40cm_2_scaffold_18602_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5586..6638)
DNA (1053bp) protein (351aa)
response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver modulated metal dependent phosphohydrolase id=14626650 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator
13_1_40cm_2_scaffold_18602_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6640..7596)
DNA (957bp) protein (319aa)
Diguanylate cyclase id=2338959 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
diguanylate cyclase
13_1_40cm_2_scaffold_18602_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7660..7896
DNA (237bp) protein (79aa)
SirA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SirA family protein id=2338958 bin=GWA2_Methylomirabilis_73_35 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SirA family protein
13_1_40cm_2_scaffold_18602_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7856..9061
DNA (1206bp) protein (402aa)
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminotransferase class V id=2338873 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
cysteine desulfurase
13_1_40cm_2_scaffold_18602_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9841..10290
DNA (450bp) protein (150aa)
hypothetical protein id=2338870 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_18602_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10307..11386)
DNA (1080bp) protein (360aa)
malate/L-lactate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Malate/L-lactate dehydrogenase id=2338865 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
malate/L-lactate dehydrogenase
13_1_40cm_2_scaffold_18602_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11397..12041)
DNA (645bp) protein (215aa)
NADPH-dependent F420 reductase; K06988 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADPH-dependent F420 reductase id=2338864 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADPH-dependent F420 reductase
13_1_40cm_2_scaffold_18602_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12038..12805)
DNA (768bp) protein (256aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=GWA2_Rokubacteria_73_35_curated
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] id=14628085 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_18602_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12811..13491)
DNA (681bp) protein (227aa)
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=GWA2_Rokubacteria_73_35_curated
2-phospho-L-lactate guanylyltransferase id=2615049 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-phospho-L-lactate guanylyltransferase CofC
13_1_40cm_2_scaffold_18602_16
unknown

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comp(13574..13669)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 16 items

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